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Name : HydSN_0642 (HydSN_0642) Accession : YP_007647053.1 Strain : Hydrogenobaculum sp. SN Genome accession: NC_020814 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 561758 - 563068 bp Length : 1311 bp Strand : + Note : IMG reference gene:2507463305; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide suga DNA sequence : ATGATAAACATAGAAGATTTTCTAAACAAAAAAGAGTCAATATGCGTAGTAGGGCTTGGGTATGTAGGGCTTCCATTGGC TGTAGCGTTTGCAAGACATTTTAACGTAATAGGTTTTGATATAAACCAAATAAGGATAAACGAATTAAAATTAGGTATAG ACAGGACAAAGGAAACTACTCCTGAAGAACTTCTAAATAGCAATATACTTTTTACAGCCAACGAAGAGTATATAAAAAAA TGTAAATTTATTATTATTACAGTACCAACACCTATAGATAAACACAAAGTACCAGACCTAAAACCTATATTTAGTGCATC TACTATAGTTGGAAGAAATTTGCAAAAAGACAGTATAGTAGTTTATGAATCTACAGTATATCCTGGTCTAACGGAAGAAG AATGTGTACCTATATTAGAAAAAGAATCAGAACTTAAATGGAAAAAAGATTTTTTTGTGGGTTATTCACCAGAACGCATA AATCCTGGTGATAAAATACACAGGTTTGAAAATATAGTAAAAGTAGTTTCTGGAGACAGTGAATATAGTCTTAATATAAT AAGCGAAATTTACTCTAAGGTTGTAAAAGCTGGAATATTTAAAGCAAAATCTATAAAAGTTGCAGAAGCCGCTAAAGTTA TAGAAAACACCCAACGAGATATAAACATTGCGCTTATGAACGAACTATCGATGATATTTCATAAAATGGGTATAGATACA AAGGATGTATTAGAAGCCGCTTCTACCAAATGGAATTTTCTCAAATTTGAACCAGGCTTGGTAGGAGGGCATTGCATCAG CGTAGACCCTTACTATCTAACATTCAAGGCTCAAGAGTTAGGCCACCATCCAGAGGTAATTCTTTCTGGTAGAAGAGTAA ACGACAATATGCCAAACTTTGTAGTACAAAACGTTTTAAAGCTTTTAATAAAAGCAAAAAAACAGATAGAATCCTCAAAA ATAATCATATTTGGGCTCTCTTTTAAAGAAAACATTCCAGACATAAGAAACTCAAAAGTAGTAGATATATACAACGAACT TAAAGATTTTGGTATAAATACATACATATACGACCCATACGTATACAAAGATGAAGTGTTTAAAGAATATGGTATAGAAC TTCTACAAGACCCTTATGAAAAAGCACCTTACGACGCTGTAATTGTAGCGGTAAAACACAACGCTTTTGGGGAATACGAT ATAAGATTTTACGAAAATATTACTAAAAGCCCAAAAATTTTGATAGATATAAAAAGCTTATACAACAAAGATATTTTCTT AAAAAACGGCTTTCTTTATTGGAGCTTATAA Protein sequence : MINIEDFLNKKESICVVGLGYVGLPLAVAFARHFNVIGFDINQIRINELKLGIDRTKETTPEELLNSNILFTANEEYIKK CKFIIITVPTPIDKHKVPDLKPIFSASTIVGRNLQKDSIVVYESTVYPGLTEEECVPILEKESELKWKKDFFVGYSPERI NPGDKIHRFENIVKVVSGDSEYSLNIISEIYSKVVKAGIFKAKSIKVAEAAKVIENTQRDINIALMNELSMIFHKMGIDT KDVLEAASTKWNFLKFEPGLVGGHCISVDPYYLTFKAQELGHHPEVILSGRRVNDNMPNFVVQNVLKLLIKAKKQIESSK IIIFGLSFKENIPDIRNSKVVDIYNELKDFGINTYIYDPYVYKDEVFKEYGIELLQDPYEKAPYDAVIVAVKHNAFGEYD IRFYENITKSPKILIDIKSLYNKDIFLKNGFLYWSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-108 | 58 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-97 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-97 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HydSN_0642 | YP_007647053.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-97 | 55 |
