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Name : HydSN_0254 (HydSN_0254) Accession : YP_007646682.1 Strain : Hydrogenobaculum sp. SN Genome accession: NC_020814 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 213711 - 215390 bp Length : 1680 bp Strand : - Note : IMG reference gene:2507462917; PFAM: Type II secretion system (T2SS), protein E, N-terminal domain; Type II/IV secretion system protein DNA sequence : ATGCCGGATATAGAGAGGAACTTAAGGTTTTTAAAATTTTTACAAAATGAAGGGCTCATAGATGACAATACGGTAAAAGA GTTAAAAGACCTCGATATAGACATAGTAAGTTATCTTGTAGAAACTAAAAAAATAACTGAGCAAGATCTTCTTAACGCGT ATTCAAAAATGTTTAAACTTGTAGATAAAGATGGTAGTGTAGTAAATATAGATAAAATAGATAAAAATCTTTTAAACTTA TTTCCTCAAGATTTTATAGTAAAAAATAAAATAATACCTATTTCTATGTCTGATAATAGCGTTACAGTTGCTACATACAT GCCATATATAGATGAAAATCAAATAAAGTACATTACCAAAAAGCCAAATGTAATAACCTGGTATACAACGCCGTCAAAAA TAAAAAATATTATAGAGAATCTCTTTCATTCTGGATCTATAGACTTAAACGCAGAAGAAGTATATATAGAAGCACAACAA GAATACAATATCAATATAGAAAAATTAGTAGAACAATCAAGCGAAAGTGCAATTGTAAAGTTGGCTGATTCTATACTCTA TAGAGCTGTTAAAGACGGTGCTTCTGATATACATATAGAGCCTCAGGAAAAAGAAATTGTTCTAAGATTTAGAATAGATG GAATGCTAAAAAAAATAGACACTTACCCAACAAATATAAAAGACCCGCTCGTATCTAGGTTTAAAATATTGGCAAACCTT GATATATCAGAAAGGAGAAAGCCCCAAGACGGAATCATAAAAATAAGGATATCAAACAAAAAGGTGCAACTAAGAGTATC AACGCTTCCTACAATATTTGGTGAAAAATTAGTCATGAGAGTGCAGTTTCCCGATGAGTTTTCAGCTTTAAAACTAGAAA CGCTTGGATTTGAAGAAGATGAAGTGAAAAAACTAAAGCAAACTTACACTAAACCTTATGGGATAATACTAGTGGTAGGA CCCACAGGTAGCGGAAAAACTACAACGCTTTATTCAATACTACAAGACTTAAACAAAGAAGATGTAAACATAGTAACCGC CGAAGACCCCGTAGAAATAAATATACCAGGGCTTAATCAAGTTCAAATAGATGAAAAAGTAGGAAGGACTTTTGAAGCGG TTTTAAGATCGTTTTTGAGGCAAGACCCAGATATTATGCTTGTAGGTGAAATAAGAGATGCCATAACAGCTGAAATAGCT ATAAAATCCTCTCTTACTGGGCACTTAGTCTTATCAACGCTTCATGTAAACGATGCACCAAGCACAGTGGCGAGGCTTAT AGATATGGGAATAGAACCATTTTTAATATCATCTTCACTTTTGGCAGTATCTGCTCAAAGGCTTGTTAGAAAGTTATGTC CACACTGCAAAATACCATATGAGCCCACAAAAGAAGAAAGAGAATATTATGGCATCACTGCTGATGTAATATATAAACCA AACAAACAAGGTTGTGAATACTGCAACCACTTAGGTTATAAAGGAAGAACTGTAATAGCAGAACTAATGTTTGCAGATAA CGAAATAAGAGAGGCTATAAACCAAAGAAAAACCACAGAAGAAATAAGAGAAATAGCTATTAAAAAAGGTATGAAAACCT TGTTTCAGTCTGGTATAATAAAAGTAAACAAAGGAATTACATCTTTAGAAGAGGTGTTAAGAGTGTCTATACAAGATTAA Protein sequence : MPDIERNLRFLKFLQNEGLIDDNTVKELKDLDIDIVSYLVETKKITEQDLLNAYSKMFKLVDKDGSVVNIDKIDKNLLNL FPQDFIVKNKIIPISMSDNSVTVATYMPYIDENQIKYITKKPNVITWYTTPSKIKNIIENLFHSGSIDLNAEEVYIEAQQ EYNINIEKLVEQSSESAIVKLADSILYRAVKDGASDIHIEPQEKEIVLRFRIDGMLKKIDTYPTNIKDPLVSRFKILANL DISERRKPQDGIIKIRISNKKVQLRVSTLPTIFGEKLVMRVQFPDEFSALKLETLGFEEDEVKKLKQTYTKPYGIILVVG PTGSGKTTTLYSILQDLNKEDVNIVTAEDPVEINIPGLNQVQIDEKVGRTFEAVLRSFLRQDPDIMLVGEIRDAITAEIA IKSSLTGHLVLSTLHVNDAPSTVARLIDMGIEPFLISSSLLAVSAQRLVRKLCPHCKIPYEPTKEEREYYGITADVIYKP NKQGCEYCNHLGYKGRTVIAELMFADNEIREAINQRKTTEEIREIAIKKGMKTLFQSGIIKVNKGITSLEEVLRVSIQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-86 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-86 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HydSN_0254 | YP_007646682.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG1876 | Protein | 1e-86 | 47 |
| HydSN_0254 | YP_007646682.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0182 | Protein | 3e-85 | 47 |
| HydSN_0254 | YP_007646682.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2048 | Protein | 1e-87 | 46 |
