Gene Information

Name : HydSN_1573 (HydSN_1573)
Accession : YP_007647938.1
Strain : Hydrogenobaculum sp. SN
Genome accession: NC_020814
Putative virulence/resistance : Virulence
Product : ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1456781 - 1457509 bp
Length : 729 bp
Strand : +
Note : IMG reference gene:2507464236; PFAM: ABC transporter

DNA sequence : 
ATGAGCGTTGTGATAGAGGTAAAAAATGTTACAAAGATCTTTAAAAGGCATACGAAAAAATATTTTTCCATAAAGTCTGC
TTTTGTGGATTTTATAAAACACGGTAGACCACAAGTGCAGATAGTAAAAGCCCTTGACAATATAAGCTTTGATATGGTAT
CTGGAAGCACTTTGGGTATCATAGGGAAAAACGGCGCTGGTAAATCCACCCTTCTTAAAATAATATCTGGCATCATAAAA
CCCACTTCTGGAAGCGTAAAGGTAAAAGGAAGCTTAGTACCTCTTTTGGAGCTTGGCACTGGTTTTCATCCGGAGCTCAC
CGGTAGAGAAAACATCATCATAAGCGGTCTTATACTTGGGCTTTCCAAAAAAGAGATATACAAGAAAATAGATGAGATAA
TAGAGTTTGCAGAGTTAAAAGATGTGATAGATGAACCTGTAAGGACTTACTCTTCTGGTATGTATTCAAGGCTTGCTTTT
TCTACGGCTTTTAGTATAGACCCAGATATTATAATCTTGGATGAGATACTATCAGTAGGTGATATAGCTTTTATGAAAAA
AAGCAAAGAAAAGGTAAAAGAGTTTAAAAGAAGAAACAAAACGATATTGTTTGTAAGCCATGATATGACAAGTGTAAAAG
AGATGTGTGATGAAGCTATTTATATAGACAAAGGTAGGCTAATCCAAAGAGGGAAGGTAGATAATGTGGTGAGTTTGTGC
GGTTTATAA

Protein sequence : 
MSVVIEVKNVTKIFKRHTKKYFSIKSAFVDFIKHGRPQVQIVKALDNISFDMVSGSTLGIIGKNGAGKSTLLKIISGIIK
PTSGSVKVKGSLVPLLELGTGFHPELTGRENIIISGLILGLSKKEIYKKIDEIIEFAELKDVIDEPVRTYSSGMYSRLAF
STAFSIDPDIIILDEILSVGDIAFMKKSKEKVKEFKRRNKTILFVSHDMTSVKEMCDEAIYIDKGRLIQRGKVDNVVSLC
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HydSN_1573 YP_007647938.1 ABC-type polysaccharide/polyol phosphate transport system, ATPase component VFG1449 Protein 1e-13 41