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Name : HydSN_1538 (HydSN_1538) Accession : YP_007647903.1 Strain : Hydrogenobaculum sp. SN Genome accession: NC_020814 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1421081 - 1422526 bp Length : 1446 bp Strand : - Note : IMG reference gene:2507464201; PFAM: Type II/IV secretion system protein DNA sequence : ATGCAAGGCTATGTAGAAAATAGCATCCTAGATTTAGCCAAAAACTTAAGGTTTATACCCATAAAAGAAGACCAAGACAC TTTAACGATAGAGGTATCTAGCAATCAAGATGTGGCTTTTGTAAAAAATATCTTATATTTTTATTTAGACAAAAAGATAA AAACTGAGGTTTTAAGCGAAGAGGAGTTTTTAGAACATTGGAACAATTTCTTATCCCAGTCCTATCAAACTTTAGAAGAT CAAGATGTGAAACTGGAGTTTGAAACTATAGATATTTCAAAAGATGAGCTTGAAAGTCCCGCTATTATATTTGTAAACAA CATTTTATTAAAAGCCATAAAAACAGGGGCTTCTGATATACATATAGAGCCCTATGAGAAAAATGTTTTGGTTAGAATGA GGATAGACGGAAAGCTGGTGGTGGCGGAGGAACTTACCAACGGCTTTTATCAAAGTGTACTTTCTCGTATAAAGGTTATA GCAAATATGAACGTAGCTGAAAAGAGGTTACCTCAGGATGCAAGATTTAGGATAAAGATTTCAAAAAAAGAGATAGATAT AAGGGTATCCACAATACCTTCTTTATTTGGGGAAAGGGTGGTGCTTAGAATATTGGACCAATCAAATACGCCTCTTGATT TGGAAGAACTTGGGCTTTCAAAAGAAGATTATGAAAATGTATTAAACATACTTTCAAGACCATACGGCATAATACTTGTC ACAGGACCCACGGGTAGCGGTAAATCCACTAGTTTATACGCTTTTTTAAAGAGATTAAAAAGCCCATCAAAAAATATAAT AACCATAGAAGACCCAGTGGAGTATCAAATAGAGGGCATATCGCAAATTCAAGTAAATCCGAAAGTGGGTCTTACGTTCG CATCTGGGCTTAGATCTATATTAAGGCAAGACCCGGATATCATTATGATAGGAGAAATAAGGGACAAAGAAACCGCTGAA ATAGCTATACAAGCAGCTCTTACTGGACATTTGGTACTTTCTACCCTTCATACCCAAAACGCTTTATCAAGCATCACAAG ACTTTTTGATATAGGGATAGAGCCTTTTTTAATAGCTTCTTCCGTAGAAGGACTTATAGCCCAAAGGCTTGTAAGAAAGA TATGCCCTTATTGTAAGACTTCTTACAAACCTTCTTACGTAGAGATCAAAGAGTTGGGTTTAAAAGAAGGAGATTATACA TTCTACAAAGGGCTTGGTTGCGAACACTGTATGCAATCTGGCTATAAAGGTCGCATTGGGCTTTTTGAGGTAATAAACGT AGATGACAGGCTAAAGAGTCTAATATCTCAAAATCCCTCATGGGAGTATATTAAAAGCCATATACAATACAAAAGCCTAT TGGATGATGGCATAGAAAAAATATTAAATGGTATCACATCCACAGAGGAAGTGCTTCAAGTGTGCAAGATTGAGGAAGAC CAGTGA Protein sequence : MQGYVENSILDLAKNLRFIPIKEDQDTLTIEVSSNQDVAFVKNILYFYLDKKIKTEVLSEEEFLEHWNNFLSQSYQTLED QDVKLEFETIDISKDELESPAIIFVNNILLKAIKTGASDIHIEPYEKNVLVRMRIDGKLVVAEELTNGFYQSVLSRIKVI ANMNVAEKRLPQDARFRIKISKKEIDIRVSTIPSLFGERVVLRILDQSNTPLDLEELGLSKEDYENVLNILSRPYGIILV TGPTGSGKSTSLYAFLKRLKSPSKNIITIEDPVEYQIEGISQIQVNPKVGLTFASGLRSILRQDPDIIMIGEIRDKETAE IAIQAALTGHLVLSTLHTQNALSSITRLFDIGIEPFLIASSVEGLIAQRLVRKICPYCKTSYKPSYVEIKELGLKEGDYT FYKGLGCEHCMQSGYKGRIGLFEVINVDDRLKSLISQNPSWEYIKSHIQYKSLLDDGIEKILNGITSTEEVLQVCKIEED Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-91 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-91 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HydSN_1538 | YP_007647903.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG1876 | Protein | 4e-92 | 52 |
| HydSN_1538 | YP_007647903.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2048 | Protein | 2e-92 | 51 |
| HydSN_1538 | YP_007647903.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0182 | Protein | 4e-95 | 47 |
| HydSN_1538 | YP_007647903.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2426 | Protein | 5e-73 | 42 |
