|
Name : HydSN_1331 (HydSN_1331) Accession : YP_007647713.1 Strain : Hydrogenobaculum sp. SN Genome accession: NC_020814 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 1216928 - 1218892 bp Length : 1965 bp Strand : - Note : IMG reference gene:2507463994; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : ATGAACATAGATGAACTTGTCATTAACAGCATTAGATTTTTAAGCGTAGATGCCGTAGAAAAAGCTAATTCAGGACATCC CGGTATGCCCCTTGGCACCGCTCACATAGGATATATACTATTTGATAGGATTTTAAGATACAACCCAGAAAACCCCAAAT GGGTAAATAGAGATAGATTTGTGCTTTCCAATGGGCATGGTTCCATGCTTCTTTATTCGCTGCTATACCTTTATGGGTTT GATCTTACCCTTGAAGATATTAAAAACTTTAGACAATTAGGAAGTAAAACCCCAGGACACCCAGAGAGCTTTTTAACAAA AGGCGTAGAAGCCACCACAGGACCCCTTGGACAGGGTATAGCAAACGCCGTAGGTATGGCTATAGAGCAAAAACACCTTG GGGCTATATGCAACAAGCTTGATGAGCCTATATTGGACTATAAAGTCTTTTGCATGGTAGGAGACGGGGATTTAATGGAA GGGATCTCTTATGAAGCAGCAGCTTTGGCAGGGCATCTAAACCTTGACAATCTATTTATTATCTGGGACAACAACCATAT TACTATAGATGGAGACACAAGCTTAGCTTGGAGTGAAGATGTACTAAAGCGTTTTGAAAACGCAGGTTTTACCGTAAGAC ACATAGAAGACGGATACGACATTGGGCTTTTAGAAAAGACTATAAAAGAACTTTTAACAAATCAAACAAAACCAGTGTTC TTATCGGTAAGAACTCATATAGGTTATAAAAGCATAAAACAAGACAGCGCTGAAGCCCATGGGGCTCCTCTTGGAAAAGA AGCTATAGCAAAATTAAGGGAAAGCCTAAACTGGCCCTATGAACCTTTCCACATACCTCAAGAGGTATTGGATTACACAA GAAGAAAAGTAGAAGAAGGAAGAATATTAGAGCAAAAATGGCAAGAAAAGTTATTAAAATACAAAGAAACTCATAAAGAT ATTGTAGATATTTTGACAAAGAATATAAATTTGGAAAACGTAATATCACATATACCAAGGTTTACAGAAGATATGGCCAC AAGACAAGCCTCCGGCAAAGTGTTAAATGCTATAGCACCGCACATGCCAACGCTTTTTGGTGGTTCAGCAGACCTACACG AATCAAACAACACCTATATTCACAACGAAGGGGATTTTGAAGCCACAAACTACTACGGAAGAAACATACATTTTGGTATA AGAGAACATGCGATGGGAGCTATAGCCAACGGCATGGCTTACGGAGGCATCACAACTCCTTATGTGGCAACGTTTTTGGT ATTTTCAGATTATATGAGACCAAGTATAAGAGTAGCCGCTTTGTCAAAGCTACACGTGATATACATATTTACCCACGATT CTATAGGTGTAGGAGAAGATGGACCAACCCATCAACCAGTAGAACACGTACCATCTTTGAGACTAATACCAAACCTATGG GTGATGCGCCCTTGCGATGCCAATGAAACCGCTTACTGCTGGGAACTTGCTTTAAGAAGAAAAGACGGCCCAGTAGCTCT TATACTATCTCGTCAAAAGCTAAAAACCTTAGATAGGACAAAGTATACCAAAGAAAATATGACAAAATATGGAGCATACG TGCTTTCTGGTGCTCCAAATCAAGAATTTACCATAATAGCATCAGGATCTGAAGTAGGATTGGCTTTGGCTCTCCAAGAC AAACTTGCCGAAAACGGCATACAGTCTTCTGTAGTAAGTGCTCCTTGTTTAGAGCTTTTTGAAATGCAAGATGAAGCTTA TAAAAAAGAGGTCATTCCAAAAAATACAAAGCACATAGTAATAGAAGCTGCTAAAGGAGATATCTGGTATAAGTATGTAA ACAAAGACGCCCTTGTAATATCTATGGAAACCTTTGGCAAATCTGGAAAAGGCCCAGAGGTTATGAAACATTTTGGTTTT GACGAAGAATATATATATCAAAAAGTGAAAGAAAAATGGATGTAA Protein sequence : MNIDELVINSIRFLSVDAVEKANSGHPGMPLGTAHIGYILFDRILRYNPENPKWVNRDRFVLSNGHGSMLLYSLLYLYGF DLTLEDIKNFRQLGSKTPGHPESFLTKGVEATTGPLGQGIANAVGMAIEQKHLGAICNKLDEPILDYKVFCMVGDGDLME GISYEAAALAGHLNLDNLFIIWDNNHITIDGDTSLAWSEDVLKRFENAGFTVRHIEDGYDIGLLEKTIKELLTNQTKPVF LSVRTHIGYKSIKQDSAEAHGAPLGKEAIAKLRESLNWPYEPFHIPQEVLDYTRRKVEEGRILEQKWQEKLLKYKETHKD IVDILTKNINLENVISHIPRFTEDMATRQASGKVLNAIAPHMPTLFGGSADLHESNNTYIHNEGDFEATNYYGRNIHFGI REHAMGAIANGMAYGGITTPYVATFLVFSDYMRPSIRVAALSKLHVIYIFTHDSIGVGEDGPTHQPVEHVPSLRLIPNLW VMRPCDANETAYCWELALRRKDGPVALILSRQKLKTLDRTKYTKENMTKYGAYVLSGAPNQEFTIIASGSEVGLALALQD KLAENGIQSSVVSAPCLELFEMQDEAYKKEVIPKNTKHIVIEAAKGDIWYKYVNKDALVISMETFGKSGKGPEVMKHFGF DEEYIYQKVKEKWM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-121 | 45 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 5e-117 | 44 |
