Gene Information

Name : A11Q_1934 (A11Q_1934)
Accession : YP_007645757.1
Strain : Bdellovibrio exovorus JSS
Genome accession: NC_020813
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1956053 - 1958599 bp
Length : 2547 bp
Strand : -
Note : COG0542O

DNA sequence :
ATGAGTCAGGATATGCAGAAAATGACCCGTAAAAGCCAAGAGGCGATGCAGGCCGCGGCACAGGCAGCTGAAACAGCTCG
CAATAGTGTTGTGGAGCCAGAGCATTTACTGGTGGAGATCGTCGAACAAGACGGTGGGTTAGTGCCTCGCTTATTAGAAG
AAATTGAAATCAAACCGAAGGCTGTACTGCCTTTGTTAGAGCGTTATGTAGCGAAGCTGCCTAAGTTAGGGCAGGCTCCG
CAACAAGTCTATGCCAGTAATAGACTTCAAAAAATATTTCAAGCGGCCGAGCAAGAAGCCCGTGAAAATCAAGATGAGTT
GATTTCCACAGAGCATTTTTTCTTAGCGATGCTGAAGTCGAGTGACTCGGATCTTAAGTCAATTTTTCGTGAAGCTAAGA
TTGATTTAAAAGGTATCCAAGAAGCTCTTAAAAAAATTAAAGGAAATAAAAAAGTGACAGACGATACACCAGAAAATCAA
TACGAAGTTCTTAAAAAGTATGCGCGAGATCTAACTGAACTAGCTCAGACAGGAAAGCTGGACCCCGTTGTGGGACGCGA
TGAAGAGATTCGTCGTGTGGTTCAGGTGTTGTCTCGTCGTACAAAAAATAATCCAGTTCTTATCGGGGAACCGGGTGTTG
GTAAGACAGCCATCGCTGAGGGCCTTGCTTTACGTATTATAAAAAAAGACGTGCCAGAAAATCTTTTAGGAAAAAAATTG
ATGTCGCTAGATATGGGTTCTTTGATCGCAGGCGCAAAATATCGCGGTGAGTTCGAAGATCGTTTGAAAGCGGTTATTAA
AGAAGTGGTTGAAAGTTCAGGACAAATTATTTTGTTCATTGATGAATTGCACACACTGGTTGGTGCCGGCAAAGGCGAAG
GCGCCATGGATGCTGGGCAGTTACTTAAGCCAGCTTTGGCGCGCGGCGAACTGCGCTGTATCGGTGCGACGACCTTAGAT
GAGTACCGTCAGCATATCGAAAAAGATGCGGCCTTAGAACGTCGATTCCAAACAGTGTTGGTGGAAGAGCCAAGTGTGGA
CGAAACGATTACCATTCTACGCGGTCTTAAGGAAAAATATGAAGTGCATCATGGTGTACAGATCACGGACCCCGCGCTGG
TGGCCGCTGCGAAGTTATCGCATCGCTATATCACAAACAGATTCTTGCCGGATAAAGCGATCGACTTAATTGACGAAGCA
GCAAGTAAGTTAGCGATTGAAAATCGCAGTGTACCAGAAGCTGTAGACGAGATCGAACGTAAGATTCTAAGTTTGAAAAT
TGAATTGGAAGCTTTGAAAAAAGAAACAGACGCTCAGTCAAATGATCGTCGTTCTAAAATTGAGGCTGAATTGTCTGAAC
TGACAAAAGAGTTGCAGGTTCAAAAAGAACAGTGGCAGCTCGAACGCTCACAAATCGACAATGTTAAAAAAACAAAGGCA
GATATCGAGTCAGTCCGTTCGGCGATTGAAAAAGCAGAGCGCGAGGCGCAATTTGAAAAAGCAGCACAATTAAAATACGG
AGAGCTTCCAGAGCTAGAAAAGAAATTGAAATCTCTAGAAGAAAAAATCAAAGGCAATCAATCAGCTATTCTGAAAGAAA
AAGTAGATGCCGAAGATATTGCGGAAGTGATTTCTAAATGGACTAAGATTCCGATTTCAAAAATGTTAGAAAGCGAATCG
CAAAAGCTTCTGCGCATGGAAGAGGAACTTAAAAAACGTGTCATTGGGCAGGATCGTGCGTTGGAAGTGATTTCTGATGC
TATTCGACGCTCACGTGCTGAAATCTCGGACCCTAATCGTCCGATGGGTAGCTTTATATTTGTAGGCCCAACGGGCGTAG
GTAAAACAGAAACTGTAAAAGCTTTGGCGGACTTTCTGTTTGATGACCCTCAATCCATTGTGCGTATTGATATGAGTGAG
TACATGGAAAAACACTCTGTATCACGTTTGATCGGAGCGCCTCCGGGCTATGTGGGCTTTGAAGATGGTGGACAGTTGAC
GGAAGCGGTCCGACGTAAGCCATACTCAGTTGTTCTTTTTGATGAAATTGAAAAAGCACACTCAGATGTGTTCAATGTAC
TGTTGCAGCTTTTAGATGAAGGACGTCTGACGGATAGCCAAGGGCGTACTGTGGATTTTAAAAACTGTATCATCGTGATG
ACATCTAATTTAGGAGCTGGCCAAGGCCACGATGCGATCCAAGCGGCGCTTAGACAGTTTTTCAGACCTGAGTTTTTAAA
TCGTGTGGATGACATCATCGAGTTCAACTCGTTAGAAAAAGATAATATGATTCACATCGTGAAAATTCAGTTGGAAGATG
TGGTGAAACGTCTGAAAGAAAAACAGATCGAGTTAAGTTTTTCTGATGAGGTTTTAAATTGGTTGGCAGCAAAAGGATTT
GATCCACAGTTTGGTGCAAGACCTTTGAAGCGTTTGATTCAATCTGAGATTTTAAATCCACTGGCGAAAAAATTAATCGC
TCAAGAATTTAAGGCCCAGTCTAAAATTCTAGTGGACTATAAAAATAATGAGCTAGTTTTCAAATAA

Protein sequence :
MSQDMQKMTRKSQEAMQAAAQAAETARNSVVEPEHLLVEIVEQDGGLVPRLLEEIEIKPKAVLPLLERYVAKLPKLGQAP
QQVYASNRLQKIFQAAEQEARENQDELISTEHFFLAMLKSSDSDLKSIFREAKIDLKGIQEALKKIKGNKKVTDDTPENQ
YEVLKKYARDLTELAQTGKLDPVVGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIKKDVPENLLGKKL
MSLDMGSLIAGAKYRGEFEDRLKAVIKEVVESSGQIILFIDELHTLVGAGKGEGAMDAGQLLKPALARGELRCIGATTLD
EYRQHIEKDAALERRFQTVLVEEPSVDETITILRGLKEKYEVHHGVQITDPALVAAAKLSHRYITNRFLPDKAIDLIDEA
ASKLAIENRSVPEAVDEIERKILSLKIELEALKKETDAQSNDRRSKIEAELSELTKELQVQKEQWQLERSQIDNVKKTKA
DIESVRSAIEKAEREAQFEKAAQLKYGELPELEKKLKSLEEKIKGNQSAILKEKVDAEDIAEVISKWTKIPISKMLESES
QKLLRMEEELKKRVIGQDRALEVISDAIRRSRAEISDPNRPMGSFIFVGPTGVGKTETVKALADFLFDDPQSIVRIDMSE
YMEKHSVSRLIGAPPGYVGFEDGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNVLLQLLDEGRLTDSQGRTVDFKNCIIVM
TSNLGAGQGHDAIQAALRQFFRPEFLNRVDDIIEFNSLEKDNMIHIVKIQLEDVVKRLKEKQIELSFSDEVLNWLAAKGF
DPQFGARPLKRLIQSEILNPLAKKLIAQEFKAQSKILVDYKNNELVFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11Q_1934 YP_007645757.1 ABC transporter ATPase VFG2076 Protein 6e-125 42