Gene Information

Name : A11Q_1460 (A11Q_1460)
Accession : YP_007645283.1
Strain : Bdellovibrio exovorus JSS
Genome accession: NC_020813
Putative virulence/resistance : Virulence
Product : nucleotide sugar epimerase/dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1481143 - 1482990 bp
Length : 1848 bp
Strand : -
Note : COG1086MG

DNA sequence :
ATGCATATGTCAGTGGCCCGATTACCTCGACGAATCAAAATTTTAATAGTGCTTTTTAGTGATCTAATTCTTTTACCATT
AGCTTTATGGTCGGCAGTTGCACTTCGTTTTGGGACATTTCAGCCGTATGTTCAAGATTATTGGTGGTTATTCGGTGTTT
TACCTTTATTTACCATTCCGATCTTTGCGCGATTGGGTCTTTATAGGGCTGTGATACGCTATGTAGACACTGAAATTATG
AAAACAGTGTTATATGGGGTAACTATTTCGGTGCTTTTGTTGACAACGATAGTGACAATGACACGGGTTCAAGGATTGCC
GCGCTCTTCAATTATTATTTATTGGATACTTTCTGCGCTTTACATTGCCGCAAGTAGATATTTAGCAAGAGGAATTCTGC
TTTCGCTAGAGTCTAAGGAACGCTACAAGCAGAAAGTTGCTATTTACGGTGGAGGCAAGGCGGGGCTTCAGACGGCCTTA
GCTTTGATGAACGGCCCAGAGTATAAGCCTGTATTATTTTTTGATGATAACGTCGAGTTACACGGGACGACTATAGCGGG
GATACGTGTATTTAATCCGAAGCTAGCTGAAGAAACCATGTTACAATATGGCTGCAATCAGTTATTACTAGCCGTGCCCT
CGGCACCACGATCAAAGCGTCGTGAGATCATACGACGCTTTGAAGGCAAAAATATTCACTTAAAAACAATCCCAGGTATG
GGGGAGTTGGTTACTGGGCAAGTGAAGGTTGATGACATTAGAGAAGTAGGTATTGAAGATTTACTAGGTCGCGATCCAGT
ACCGCCGTTTGAACATTTAATATCCGTTTGTATAGAGAAAAAAGTTGTTTTAGTTACTGGAGCTGGAGGTTCGATTGGAT
CTGAACTATGTAGGCAAATATTAAGACATCACCCCGCTCGCGTGATTTTATTCGAAAGGTCAGAGTATTTATTATATAAG
ATTGAACGAGAGCTGTCTGAGCTCTGTTGCCATGCTGAAGTGGTTCCTATTTTAGGCGATGTTTTAGACAAGCAATCTGT
TGATCGAGTTATACGGCAATACGATGTTAAGACGATATATCATGCGGCAGCATACAAGCATGTACCCTTGGTGGAAGCTA
ACATAGTAGCAGGAGTTATGAATAATGTCTTTGGAACTTTAAATGTTGCCAAAGCGGCGATTGATCAAAAGGTTGAAACA
TTTGTACTTATATCCACTGATAAAGCGGTGAGGCCTACCAATGTTATGGGTGCTACAAAAAGGCTTGCAGAGCTAATCTT
ACAAGCATTGGCTAGTAAAAAGCCATCTACGCGATTTTGCATGGTCAGATTTGGAAATGTCTTGGGTTCGTCAGGATCTG
TTGTTCCACTGTTTCGAGAGCAGATACGTAATGGTGGCCCAGTGACGGTCACTCATCCAGAAGTCACAAGATATTTTATG
ACAATACCTGAGGCATCTCAGCTTGTTTTGCAAGCTGGTGCGATGGGAGCGGGTGGAGAGGTTTTTGTTCTCGATATGGG
TGAGTCAGTACGTATCTCAGATCTAGCAAAAAAAATGATTGTGCTAAGTGGCCTAGAAGTTAAAGACCCTGAAACTAAAA
GGGGTGACATAGCCATTCAATATATTGGTTTAAGGCCGGGTGAGAAATTGTATGAAGAGCTTTTGATTGGATACAATGTG
GGTATAACGCAACATCCAAGAATAATGAAAGCCGATGAGGACTTTATAGAATTTTCAGATTTGATGGGCTTGCTTGAGTT
ATTAAAGGTTGGTTGTGATGAGCAGGATGCAGGTAAAGTTATAGAAATTTTAAGAAAATCAGTAAAAGAATATCTGCCGG
CTAAGTAA

Protein sequence :
MHMSVARLPRRIKILIVLFSDLILLPLALWSAVALRFGTFQPYVQDYWWLFGVLPLFTIPIFARLGLYRAVIRYVDTEIM
KTVLYGVTISVLLLTTIVTMTRVQGLPRSSIIIYWILSALYIAASRYLARGILLSLESKERYKQKVAIYGGGKAGLQTAL
ALMNGPEYKPVLFFDDNVELHGTTIAGIRVFNPKLAEETMLQYGCNQLLLAVPSAPRSKRREIIRRFEGKNIHLKTIPGM
GELVTGQVKVDDIREVGIEDLLGRDPVPPFEHLISVCIEKKVVLVTGAGGSIGSELCRQILRHHPARVILFERSEYLLYK
IERELSELCCHAEVVPILGDVLDKQSVDRVIRQYDVKTIYHAAAYKHVPLVEANIVAGVMNNVFGTLNVAKAAIDQKVET
FVLISTDKAVRPTNVMGATKRLAELILQALASKKPSTRFCMVRFGNVLGSSGSVVPLFREQIRNGGPVTVTHPEVTRYFM
TIPEASQLVLQAGAMGAGGEVFVLDMGESVRISDLAKKMIVLSGLEVKDPETKRGDIAIQYIGLRPGEKLYEELLIGYNV
GITQHPRIMKADEDFIEFSDLMGLLELLKVGCDEQDAGKVIEILRKSVKEYLPAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-77 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11Q_1460 YP_007645283.1 nucleotide sugar epimerase/dehydratase VFG0029 Protein 3e-116 48
A11Q_1460 YP_007645283.1 nucleotide sugar epimerase/dehydratase VFG1300 Protein 1e-76 46