Gene Information

Name : A11S_1967 (A11S_1967)
Accession : YP_007643388.1
Strain : Micavibrio aeruginosavorus EPB
Genome accession: NC_020812
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2018519 - 2019388 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGACGCCACAATTCACCTGCACAATGTCGGCGTGACGTACCCGAACGGGCACAGCGCCCTGCATGACGTCAATGT
CACGCTGCATTCCGGGGTGATTTGTGGCTTGGTCGGCGTCAACGGGGCCGGGAAATCGACCCTGTTCAAAACCATGATGG
GGTTTATCACCCCCACCACGGGCACGGTGACCATCGCCGGACAAAGCGTGAAGCAGGCCCTGCGCCGGAACATGGTGGCT
TATGTCCCGCAGACGGAGGAAGTGGATTGGAACTTCCCCGTTCTGGTCGAAGACGTGGTGATGATGGGGCGGTACGGTCA
TATGGGATTCCTGCGCAACCCGAAACAGCCCGACCGCGATGCCGTGGACAGCGCCCTGAAACGCGTCGGCATGCTTGATT
ACAAAAAACGCCAGATTGGCGAACTGAGCGGCGGGCAGAAGAAACGCATTTTCGTCGCCCGCGCCCTGGCACAAGGCGGA
TCCATCATCCTGCTGGACGAACCGTTCACTGGCGTGGATATTAAAACCGAGGCGTCCCTGATCGAATTGTTCCGGTCACT
GGCCGCCGAAGGGCGCATGATTTTGGTGTCCACCCACAATTTGGGCAGTGTGCCCAGTTTCTGTGATGAAGTGATCTTGA
TCAACCGGACCGTGATTGCGTATGGGCCAGTTGAAACAACCTTTACCGAAGCGAATTTGACGAAAGTCTTTGGCGGCATG
CTGCGCCACCTGCAACTGGCGGGACGCGATTTGCATGATGACGAAGATTCACGCTGCGTTACGGTTCTGACCGATGATGA
ACGCCCGCTGGTTCTGTACGGAGAACAGGGCGGGGAACGGATCGTAAAAACAGGGCGCGATAAACCATGA

Protein sequence : 
MNDATIHLHNVGVTYPNGHSALHDVNVTLHSGVICGLVGVNGAGKSTLFKTMMGFITPTTGTVTIAGQSVKQALRRNMVA
YVPQTEEVDWNFPVLVEDVVMMGRYGHMGFLRNPKQPDRDAVDSALKRVGMLDYKKRQIGELSGGQKKRIFVARALAQGG
SIILLDEPFTGVDIKTEASLIELFRSLAAEGRMILVSTHNLGSVPSFCDEVILINRTVIAYGPVETTFTEANLTKVFGGM
LRHLQLAGRDLHDDEDSRCVTVLTDDERPLVLYGEQGGERIVKTGRDKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-79 61
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-79 61
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-79 60
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-80 60
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-80 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11S_1967 YP_007643388.1 Manganese ABC transporter, ATP-binding protein SitB BAC0440 Protein 4e-89 63
A11S_1967 YP_007643388.1 Manganese ABC transporter, ATP-binding protein SitB BAC0350 Protein 3e-80 60
A11S_1967 YP_007643388.1 Manganese ABC transporter, ATP-binding protein SitB BAC0400 Protein 3e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11S_1967 YP_007643388.1 Manganese ABC transporter, ATP-binding protein SitB VFG0526 Protein 3e-80 60