Gene Information

Name : A11S_1966 (A11S_1966)
Accession : YP_007643387.1
Strain : Micavibrio aeruginosavorus EPB
Genome accession: NC_020812
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, periplasmic-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2017575 - 2018519 bp
Length : 945 bp
Strand : +
Note : -

DNA sequence : 
ATGTCACGCGCCCATCGCACGTTTTCTTCCCGCCGCTTCACGGTTCTGGCTTTATTGACGTTGATCCTGGCCACCCCCCA
GACCGCCGCGGCGGAGCAGGAAAAAATCAAGGCCGTGACCACCTTCACCGTCATCGCCGATATTGCGCGGAATGTCGCGG
GCGATGCGGCCATCGTCGAATCCATCACCAAACCCGGTGCCGAAATTCACGATTACCAACCCACCCCGCAGGATATTATC
CGCGCACAGGGGGCCGACATTATCCTCTGGAACGGGATGAATCTGGAACGCTGGTTCGAAAGGTTCCTGCAAGACGTCAA
AGATGTACCCAGTGTTGTGGTGTCCGACGGGGTTGAACCCATATCCATTTACGAAGGCCCCTATACCGGGAAACCGAATC
CACACGCGTGGATGTCGACCGAAAATGCCATTTTATATGTCGACAATATCCGCAAAGCCTTCATCGCCGCCGATCCGGCC
AATGCCGATATTTATAACAAAAACGCCAGCGCCTATACGGACAAAATCCGCACCATCAAGGCGGATTTAACCCCGATGCT
GGACAACATTCCCAAAGACCAGCGTTATCTGGTCACCAGCGAAGGGGCATTCAGCTATCTCGCCCGCGATTTGAAGATGA
AGGAAGTGTATTTGTGGCCCATCAATGCGGACCAGCAGGGCACCCCGCAACAGGTGCGCGCCGTCATCGACCGCGTGCGT
GAAAAAAATATCCCGGTCGTGTTTAGCGAAAGCACCATTTCCGACCGCCCGGCCAAACAGGTGGCATCGGAAACGGGCGC
GGCCTATGGCGGCGTTCTCTACGTCGACTCGCTCAGTGAGCAGGATGGCCCGGTCCCGACCTATCTGGATCTGCTGAAAG
TGACCACACACACCATTGCCGAGGGATTTCAGGCGGCCATGAAGAAAACTGCGGAGAAAAAATAA

Protein sequence : 
MSRAHRTFSSRRFTVLALLTLILATPQTAAAEQEKIKAVTTFTVIADIARNVAGDAAIVESITKPGAEIHDYQPTPQDII
RAQGADIILWNGMNLERWFERFLQDVKDVPSVVVSDGVEPISIYEGPYTGKPNPHAWMSTENAILYVDNIRKAFIAADPA
NADIYNKNASAYTDKIRTIKADLTPMLDNIPKDQRYLVTSEGAFSYLARDLKMKEVYLWPINADQQGTPQQVRAVIDRVR
EKNIPVVFSESTISDRPAKQVASETGAAYGGVLYVDSLSEQDGPVPTYLDLLKVTTHTIAEGFQAAMKKTAEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-84 69
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-84 69
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-84 69
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-84 69
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-84 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11S_1966 YP_007643387.1 Manganese ABC transporter, periplasmic-binding protein SitA BAC0349 Protein 3e-84 69
A11S_1966 YP_007643387.1 Manganese ABC transporter, periplasmic-binding protein SitA BAC0439 Protein 3e-86 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11S_1966 YP_007643387.1 Manganese ABC transporter, periplasmic-binding protein SitA VFG0525 Protein 3e-84 69