Gene Information

Name : A11S_1356 (A11S_1356)
Accession : YP_007642785.1
Strain : Micavibrio aeruginosavorus EPB
Genome accession: NC_020812
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1395748 - 1398360 bp
Length : 2613 bp
Strand : -
Note : -

DNA sequence :
ATGGATTTTGAAAAATTTACCGAGAAAACCCGCTCTTTCCTGCAAAAGGCTCAGACGCTGGCCATGCGATCGGATCACCA
GTCGCTGGAGCCGGAGCACCTGCTGAAAGTGATGCTGCAGGATGAGGATGGCATGGTCCAGCGCCTGATCGGTTCGGCGG
GCGGGGATGTGAACCGTTTGATGCGCGAAGTTGAGGGTGCGCTGGCCAAAATTCCGTCCGTTACGGGTGGTGGCGCAGGT
GGTTTGCGTATTTCAACCGATCTCGCAAAAATCCTTGATAACAGTTTGAATTTGGCTGAAAAATCAGGTGACAAGTTTAT
CACAGCAGAGCGGATTTTGCAGGCCTTCCTGCTGGCGCGATCCGCGGATGTTGCGGGGCTGATCGAGGCGTGCGGTGTCA
ATGCTGCCAAGCTCAATCAGGCGATCAACGATATGCGCAAGGGGCGTACGGCCGATACGGCGAGCGCTGAGGGCGGTTTC
GATGCCCTGCGCCGTTATGCTCGCGATCTGACCGAAGTGGCCCGTGAGGGCAAATTGGACCCGGTGATTGGCCGGGATGA
GGAAATTCGTCGCACCATCCAGGTTCTGTCCCGCCGGACCAAGAACAACCCGGTTTTGATCGGGGAGCCGGGCGTGGGTA
AAACCGCGATTATCGAGGGGCTGGCCCTGCGGATCGTGAATGGCGATGTGCCGGAAAGTTTGAAGGATAAGCGCCTGATG
GCGCTGGATCTGGGTGCGCTTCTGGCCGGGGCCAAATTCCGGGGCGAGTTTGAAGAGCGGCTGAAGGCCGTGATGGATGA
GATTAAATCCCATGCCGGGGAAATCGTCCTGTTTCTGGACGAATTGCACACCGTGGTCGGGGCCGGAAAGGCCGAAGGGT
CCATGGATGCCGGCAACATGCTGAAGCCTGCGCTTGCCCGGGGTGAGCTGCATATGGTCGGGGCCACCACGCTGGATGAA
TACCGCAAGCATATCGAAAAAGACGCGGCGCTGGCGCGGCGCTTCCAGCCCGTTTTCGTGTCAGAGCCAACGGTTGAAGA
TACCATCTCTATCCTGCGGGGATTAAAGGAAAAATACGAAATGCACCACGGGGTGCGCATCACGGATTCCGCGATTGTTG
CGGCGGCGACCTTGTCGCATCGCTATATCACCGACCGGTTCTTGCCGGACAAGGCGATTGACTTGGTGGATGAAGCGTCC
AGCCGTTTGCGGATGCAGGTGGATTCCAAACCCGAAGCGGTGGATGAGCTGGATCGCCGGATAATTCAGTTGAAGATCGA
GCGCCAAGCCCTTCAAAAAGAAAAAGATTCTGCCTCTCTGGATCGGCTGGAAAAGTTGGAAGCCGAGCTGACCGAGCTGG
AGAAAAAATCCGCCGATCTGACGGGGGCGTGGAAGGCGGAGAAGGACAAGTTGGGCGCGGCCCAGCGCCTGACCGAAGAG
CTGGACAAGGCCCGGACCGAATTGGAGCGGGCCCAGCGCGAGGGCAATCTGGAGAAAGCGTCCGAGCTGCTCTATGGCCG
CATCCCGGAATTGGAGCGGTTGCTGGAAAAAGCCGGGCAAGCCAACGGCGCAACGGGCTCTATGATCAAGGAGCAGGTTG
AGGCTGATGACATCGCCGCCGTGGTCAGCAAATGGACCGGAATTCCCGTTGATAAAATGCTTGAAGGTGAACGGGATAAG
CTCCTGAAAATGGATGAAAAACTGATGGAGCGTGTGGTCGGCCAAGAAGCCGCTGTTCACGCCGTATCCAACGCCGTGCG
CCGCGCACGGGCGGGTCTGCAGGACCCACGCCGTCCCATTGGGTCGTTCCTGTTCCTCGGCCCCACAGGGGTCGGGAAAA
CGGAATTGACCAAGGCCTTGGCCGAATTCCTGTTTGATGATGATACGGCCCTGGTCCGGTTGGACATGTCCGAATACATG
GAAAAACATTCGGTCGCCCGCATGATCGGTGCCCCCCCGGGCTATGTCGGGTATGAGGAGGGCGGAGCCCTGACCGAAGC
GGTGAGGAGACGCCCGTATCAGGTTGTTTTATTTGACGAAGTTGAAAAAGCCCACCCGGATGTTTTCAACGTCCTGCTGC
AGGTTCTGGATGATGGTCGTCTGACCGATGGTCAGGGCCGGACAGTCGATTTCTCGAACACTGTTTTGATCATGACCTCG
AACCTCGGCGCTGACCATCTAGTGAACCAGAAGGATGGCGAGGATGTGGAGAAGGTCCGCGACAAGGTGATGGAAGCCGT
TCGCAAGGCGTTCCGCCCGGAATTCCTGAACCGTCTGGACGAAATCCTGCTGTTCCGCCGTTTGGGCCGGGATCAGATGG
CCGGGATTGTGGAGATCCAGCTGGGGTACCTGCGTAAACTTCTGGCTGATAAACGCATCACGCTGGAGATGGATGCCAAG
GCGATCCAGTGGCTGGCCGATAAGGGTTACGATCCGGCCTATGGTGCCCGCCCGCTGAAACGGGTGATCCAGAACACCAT
GCAAAACCCGCTGGCCGGGATGATCCTGCAGGGCGATATCCGCGACGGGTCCACCGTGGCGGTGAGCGTCGGCAAGGGTG
ACCAGCTGGATTTCAAGGTCACGAAATCCGGCCCGGCGAAGGTCGCGGCGTAG

Protein sequence :
MDFEKFTEKTRSFLQKAQTLAMRSDHQSLEPEHLLKVMLQDEDGMVQRLIGSAGGDVNRLMREVEGALAKIPSVTGGGAG
GLRISTDLAKILDNSLNLAEKSGDKFITAERILQAFLLARSADVAGLIEACGVNAAKLNQAINDMRKGRTADTASAEGGF
DALRRYARDLTEVAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVNGDVPESLKDKRLM
ALDLGALLAGAKFRGEFEERLKAVMDEIKSHAGEIVLFLDELHTVVGAGKAEGSMDAGNMLKPALARGELHMVGATTLDE
YRKHIEKDAALARRFQPVFVSEPTVEDTISILRGLKEKYEMHHGVRITDSAIVAAATLSHRYITDRFLPDKAIDLVDEAS
SRLRMQVDSKPEAVDELDRRIIQLKIERQALQKEKDSASLDRLEKLEAELTELEKKSADLTGAWKAEKDKLGAAQRLTEE
LDKARTELERAQREGNLEKASELLYGRIPELERLLEKAGQANGATGSMIKEQVEADDIAAVVSKWTGIPVDKMLEGERDK
LLKMDEKLMERVVGQEAAVHAVSNAVRRARAGLQDPRRPIGSFLFLGPTGVGKTELTKALAEFLFDDDTALVRLDMSEYM
EKHSVARMIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFSNTVLIMTS
NLGADHLVNQKDGEDVEKVRDKVMEAVRKAFRPEFLNRLDEILLFRRLGRDQMAGIVEIQLGYLRKLLADKRITLEMDAK
AIQWLADKGYDPAYGARPLKRVIQNTMQNPLAGMILQGDIRDGSTVAVSVGKGDQLDFKVTKSGPAKVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-104 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-104 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11S_1356 YP_007642785.1 ClpB protein VFG2076 Protein 3e-116 43