Gene Information

Name : A11S_1005 (A11S_1005)
Accession : YP_007642445.1
Strain : Micavibrio aeruginosavorus EPB
Genome accession: NC_020812
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1041894 - 1043126 bp
Length : 1233 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTCTGAGTGATGTTGCCTGCAGACAGGCCAAACCCCGCGAGAAATCCTACAAAATGGGCGATTCCGGGGGACTGTA
TCTAGAAATCACCCCCAAGGGCAGCAAGCTGTGGCGCATGAAATACCGCTATGGTGGCAAAGAAAAACGCCTAGCCTTAG
GGCAGTACCCAGAGGTGTCCTTAGCAGATGCCCGTGACGGGCGAGATAAGGCGCGCAAGCTGCTTGCGGAACACAATGAC
CCATCCCTCGCCAAACAGGAAAAGAAACGCCTTGCGCAAGCCAGTGCTGCCAATACGTTCGAGGCGCTGGCATTAGAGTG
GCATGAGAAGAATAAGGGCAACTGGAGCCCCAATCATGCGTCAACCGTTTTACGCCGTTTGGAACAAGACCTTTTCCCAG
CCATAGGCAACCTTCCCATAAAAGAAATCACCACCCCTCGCCTAGCGATTGTAATCGAAAATATCGAAAAACGCGGAGCC
TACGATATTGCACGTAGAGCACTACAATATAGCCGAGCAATTTTCGCCTACGCTCAGCTAAGGGGAAAAATTGACACGAA
CCCGGCAGACATCAAAGCCAAAGATTTCCTAGCCCCTATCAAACAAGGGCATTACGCCGCGATGGAAGCAAAAGACCTCC
CCGAATTTCTAAGCAAGCTCTATAGCAACGAAGCCCGGCTCTTTATTTCGACACAGCTGGCTCTAGAAATGATGCTCTTA
ACGTTTGTTCGCACCAGTGAACTGATAAAAGCGCGCTGGGACGAATTTGATTTTGAAAAAAGGCAGTGGATCATTCCCGC
AGAGCGCATGAAAATGAACCGGGATCATATCGTTCCTCTATCAAAGCAAGTTTTGAGAATCCTAGAGCAATTAAAACCCA
TAAGTGAACATAGAGAATTTTTATTCCCGGGACAGCGTAACCCCAAAACGCACATGTCAAATGGGGCGATATTAATGGCT
CTCAAACGGATGGGATATCACGGTATTCACACGGGACACGGTTTCCGCGCACTGGCCATGACAACAATCATGGAGGAACT
GGGCTATCCGCATGAGGTACCGGATACACAGCTAGCGCACGCCAAAGGCGACTCTGTTCGTCGGGCCTATGACCGTACAA
AATTCCTGGCTCAGAGAAAAAAGATGATGCAGGAATGGGCAGATTATATCGAAAATATATCACACAAGAACGGAAAACTT
ATTCAAGGACGATTTTCAAGAAAGGTATTGTAA

Protein sequence : 
MPLSDVACRQAKPREKSYKMGDSGGLYLEITPKGSKLWRMKYRYGGKEKRLALGQYPEVSLADARDGRDKARKLLAEHND
PSLAKQEKKRLAQASAANTFEALALEWHEKNKGNWSPNHASTVLRRLEQDLFPAIGNLPIKEITTPRLAIVIENIEKRGA
YDIARRALQYSRAIFAYAQLRGKIDTNPADIKAKDFLAPIKQGHYAAMEAKDLPEFLSKLYSNEARLFISTQLALEMMLL
TFVRTSELIKARWDEFDFEKRQWIIPAERMKMNRDHIVPLSKQVLRILEQLKPISEHREFLFPGQRNPKTHMSNGAILMA
LKRMGYHGIHTGHGFRALAMTTIMEELGYPHEVPDTQLAHAKGDSVRRAYDRTKFLAQRKKMMQEWADYIENISHKNGKL
IQGRFSRKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAD44730.1 Int Not tested SHI-2 Protein 2e-77 45
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 7e-77 44
int CAC39282.1 integrase Not tested LPA Protein 3e-77 44
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-77 44
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 3e-73 44
ECs4534 NP_312561.1 integrase Not tested LEE Protein 4e-75 44
int AAC31482.1 CP4-like integrase Not tested LEE Protein 3e-75 44
int ACU09430.1 integrase Not tested LEE Protein 3e-75 44
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 4e-75 44
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 4e-76 44
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 5e-76 44
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 5e-76 44
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 2e-70 44
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 9e-69 42
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 9e-69 42
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 2e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A11S_1005 YP_007642445.1 phage integrase VFG0783 Protein 2e-75 44
A11S_1005 YP_007642445.1 phage integrase VFG0598 Protein 2e-76 44
A11S_1005 YP_007642445.1 phage integrase VFG1536 Protein 1e-58 41