Gene Information

Name : PCNPT3_03155 (PCNPT3_03155)
Accession : YP_007639411.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 738521 - 739855 bp
Length : 1335 bp
Strand : -
Note : COG2056 Predicted permease

DNA sequence :
ATGCTAAATCCCGTTGTCCTCGCTGTCTGTATCATGTTAGGACTGTCACTAATGCGCGTTAATGTGGTTGTCGCTTTAAC
ATTAAGTGCCCTCATTGGCGGTTTAAGCGCTGGACTTTCACTCTCCGATACGGTGAGTGCATTTGAAGGTGGGTTAGGAG
GAGGTGCAACTATTGCCCTCAGCTACGCGATGTTAGGTGCATTTGCCGTTGCTATCTCAAAATCTGGAATAACAGACTTA
CTCGCACACGCTGTGATCAAACGTATTCAAGGCCAACATCCTGAAACGCTTTCTAATACCATTAAGTATTCTGTGTTGAT
AATGATCATGCTGATGGCACTTGCATCACAAAATGTTATCCCCGTGCACATTGCTTTTATTCCTATTTTGATCCCGCCTC
TACTTTCCGTCTTTAGCAAGTTTCGCTTAGATAGACGCCTCGTTGCATGCATTCTGACTTTTGGCTTGATCACACCTTAT
ATGGTACTACCTATCGGCTTTGGTGGGATTTTCTTACATAATATCTTACTTAAAAATTTAGCTGAGAATGGTTTGCATGT
TACCGCGAGCCAAGTTCCTCAAGCCATGATTTTACCGGCTCTTGGCATGGTGACCGGGCTATTAATTGCCGTTTTCTTTA
GCTATAGAAAGCCACGCGATTACGCGACCGATATCAAACCTAAAAATAGTCAAGCAGACAGCACATTAAAACCGGTCAAT
AAACGTCATTTAATTGTCGCCTGTATTGCGATTGTCGCGACATTAAGTGCACAACTATACTCTGGCTCAATGATTATTGG
CGCTCTAGCAGGATTTGTCGTCTTCACTTTTGGCGGTGTAATAGCTTGGAAAGAGACGAATGACATCTTTACCCAAGGTG
TGCACATGATGGCAATGATAGGCTTTATTATGATTGCGGCTGCAGGTTTTGCAGCCGTTATGAAAGCAACAGGTGGCGTA
GAAAGTCTCGTTCAACTTTTATCTACCTCAATTGGCGACAATAAACCGATAGCTGCACTCTTGATGCTAGTGATTGGCTT
GTTAGTAACGATGGGCATTGGTTCTTCTTTTTCAACAATCCCTATTTTAGCGACCATTTATGTTCCGCTTGCAGTGGCTT
TTGGCTTTTCTCCTATGGCAACTATTGCTTTAGTGGGTACAGCGGCAGCCCTTGGTGATGCAGGTTCCCCAGCCTCAGAT
TCTACATTAGGGCCAACGTCTGGACTCAATGTCGATGGTCAACATGATCATATTTGGGACTCTGTTGTACCTACCTTCCT
ACATTATAATTTACCGCTTATCGTGTTTGGTTGGATAGCAGCCATGACCCTATAA

Protein sequence :
MLNPVVLAVCIMLGLSLMRVNVVVALTLSALIGGLSAGLSLSDTVSAFEGGLGGGATIALSYAMLGAFAVAISKSGITDL
LAHAVIKRIQGQHPETLSNTIKYSVLIMIMLMALASQNVIPVHIAFIPILIPPLLSVFSKFRLDRRLVACILTFGLITPY
MVLPIGFGGIFLHNILLKNLAENGLHVTASQVPQAMILPALGMVTGLLIAVFFSYRKPRDYATDIKPKNSQADSTLKPVN
KRHLIVACIAIVATLSAQLYSGSMIIGALAGFVVFTFGGVIAWKETNDIFTQGVHMMAMIGFIMIAAAGFAAVMKATGGV
ESLVQLLSTSIGDNKPIAALLMLVIGLLVTMGIGSSFSTIPILATIYVPLAVAFGFSPMATIALVGTAAALGDAGSPASD
STLGPTSGLNVDGQHDHIWDSVVPTFLHYNLPLIVFGWIAAMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 1e-86 56
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-86 56
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-86 56
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-86 56
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 8e-94 55
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 8e-94 55