Gene Information

Name : PCNPT3_01995 (PCNPT3_01995)
Accession : YP_007639179.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 471341 - 472237 bp
Length : 897 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCAAGCGTTAACGATTGACCAATTTTTAGATTCACTGTGGCTAGAGCGAGGCTTATCACAAAACACATTAGCGTCTTA
TCGCTTTGATTTGTGTTTGGTGCAGAATTTTTTAGAAGCAAATAATAAAGTGTTAGCAGAAGCCAGTTATCAAGATCTCT
GTGATTATTTTAGCTTCCGTTTATACTCGGACATCGCATATAAAAACAGTTCAACGGCACGCTTAATGAGTGCCTTACGT
CGCTATTATCAATTTTTATGTCGCGAGAAATTACGAGATGACGATCCGAGTGCCAAACTACAAAGTCCCAAAACATTAAA
GCCATTACCTAAATCGTTGTCTGAGTCAGAAGTTGACGGACTTTTATCCGCGCCAGATTTAAGTGATAGCGTACAGTTTA
GGGATAAAGCGATGCTCGAATTGTTATATGCAACGGGTCTGCGTGTTTCAGAGCTCGTAGGTTTACAAATGCAAGAGTTA
AACTTACAACAAGGCGTAGTGCGAGTGACGGGTAAAGGCGAAAAAACACGTCTCGTGCCACTGGGCGAAGAGGCCAATTA
TTGGGTGGATCGCTATATTGAAGAGGTTCGCCCTGAATTACTCAAGGGGCGAAGCTGTGATATTCTTTTTCCAAGTCGAC
GTGGTTCGCAAATGGTAAGGCAAACATTTTGGCATCGTATTAAATATTATGCGTTACGTTGCAATATCGATAAGACCTTA
ATATCTCCGCATGTGTTGCGCCACGCCTTTGCAACGCATCTTTTAAATTATGGCGCCGATTTGCGCGTGGTACAAATGCT
TCTGGGTCATAGCGACCTCTCTAGCACCCAAATATATACGCATATTGCGCAAGATAGATTAAAAGAATTGCATAAAATGC
ATCATCCACGCGCTTAA

Protein sequence :
MQALTIDQFLDSLWLERGLSQNTLASYRFDLCLVQNFLEANNKVLAEASYQDLCDYFSFRLYSDIAYKNSSTARLMSALR
RYYQFLCREKLRDDDPSAKLQSPKTLKPLPKSLSESEVDGLLSAPDLSDSVQFRDKAMLELLYATGLRVSELVGLQMQEL
NLQQGVVRVTGKGEKTRLVPLGEEANYWVDRYIEEVRPELLKGRSCDILFPSRRGSQMVRQTFWHRIKYYALRCNIDKTL
ISPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSSTQIYTHIAQDRLKELHKMHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-59 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-59 57