Gene Information

Name : PCNPT3_01885 (PCNPT3_01885)
Accession : YP_007639157.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, small permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 442765 - 443274 bp
Length : 510 bp
Strand : +
Note : COG3090 TRAP-type C4-dicarboxylate transport system, small permease component

DNA sequence : 
ATGTTTCGTAAAATTATTGATAATATTGAAGAAATCATAACAGTGCCATTAATGGTTTCCCTGTTATGTATTTTAACTTG
GCAAATTGCATCACGTTGGCTCTTTGATTCGCCTTCATTATGGAGTGAAGAGCTTGCCAGAGTACTTTTTTTGTATATGG
CCATTATTGGGTGTGGCATCGGCATAAAAAAAGACGAGCACGTTAAAATCACCTTTTTCTCGGACAAACTACCGCGAAAT
TTAAGATATGGCATGTTGTTTATCTTAGAGATTTGTGTGCTAGCAACGATTGTCACTATGATTTATTACGGTTATGCATA
TATGCAACGTAATGCCTTTTTTGAATTAATAACATTAGGAATATCAGCCTATTGGATGAACTTATCTCTGCCATTAGGAG
GATGTTTTATGTTATTTAGACAACTACAAAAACTTTATTATATTCGCCGTGAGTGGTGTCATTTAACAACGCCTGCTGGA
TTTAAGTTAAGCACGGAAGCAACGGATTAA

Protein sequence : 
MFRKIIDNIEEIITVPLMVSLLCILTWQIASRWLFDSPSLWSEELARVLFLYMAIIGCGIGIKKDEHVKITFFSDKLPRN
LRYGMLFILEICVLATIVTMIYYGYAYMQRNAFFELITLGISAYWMNLSLPLGGCFMLFRQLQKLYYIRREWCHLTTPAG
FKLSTEATD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1778 NP_231413.1 hypothetical protein Not tested VPI-2 Protein 1e-41 64
VC0395_A1376 YP_001217319.1 hypothetical protein Not tested VPI-2 Protein 1e-41 64
VPI2_0026c ACA01843.1 TRAP-type C4-dicarboxylate transport system small permease component Not tested VPI-2 Protein 8e-42 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_01885 YP_007639157.1 TRAP-type C4-dicarboxylate transport system, small permease component VFG1111 Protein 3e-42 64