Gene Information

Name : PCNPT3_01250 (PCNPT3_01250)
Accession : YP_007639030.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 284952 - 286370 bp
Length : 1419 bp
Strand : -
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGTCTGTAAAAACTGCACAAGACGTACTTGATCTGATTCAAGAGCAAGACGTAAAATTCGTTGACTTACGTTTTACTGA
TACTCACGGTAAAGAGCAACACGTTTCAGTACCCTTTCACCAAGTAACCGAAGATTTTTTTGAAGACGGTAAAATGTTTG
ATGGGTCATCAATTGCAGGCTGGAAAGGTATTCAAGATTCAGACATGATTTTAATGCCCGATCCAAGTACTGCGGTCATT
GACCCTTTTACCGATGAGCTAACGCTAAACTTGCGGTGTGATGTTCTCGAGCCAAAAACTATGCTTGGTTACGATCGCGA
TCCCCGCTCTGTCGCTAAACGCGCAGAAGCGTACATGCGCTCAACTGGTCTTGCGGATACTATTTTATTTGGCCCTGAGC
CTGAATTCTTCCTATTCGATGACGTTCGTTACTCAAACAGTATTAATGGTGCTTTTTATGCGATTGATGCTAAAGAAGCG
TCTTGGAACTCTGGCACTGTTTACGAAGAAGGTAATACAGGTCATCGCCCAGGTATTAAAGGCGGTTATTTCCCAGTTTC
ACCCGTTGATAGTGGCCAAAATATTCGCTCGGCTATGTGTTTGATCATGGAAGAGATGGGCTTGATCGTTGAAGCGCATC
ACCATGAAGTTGCGACTGCCGGTCAAAATGAAATTGCTTGCCGCTTTAATACCATTGTAAAAAAAGCAGATGAATTACAA
ATTTACAAATATGTGGTACACAATGTAGCGCACGCTTACGGCCAAACAGCCACCTTCATGCCTAAACCTCTTGTGGGCGA
TAATGGCTCAGGTAATCATTGTCACCAATCACTTGCGAAAGATGGCGTGAATTTATTCTCTGGCGACCTTTATGGTGGTC
TATCACAAATGGCGCTCTATTATATTGGCGGTATTATTAAGCATGCTAAAGCTATCAATGCTTATACTAATGCATCAACT
AACTCATACAAACGCCTTATCCCTGGTTTTGAAGCCCCTGTCATGCTTGCTTATTCTGCGGGTAACCGTAGTGCATCTAT
TCGCATTCCTGTTGTGCCTTCACCGAAAGCATCACGTATCGAAGTGCGTTTCCCAGATCCAACCATGAACCCTTATTTAG
GTTTTTCTGTGATGCTAATGGCAGGTCTTGACGGCATTAAGAATAAAATTGATCCGGGTGAAGCGCTTGATAAAGATCTT
TATGATCTTCCTCAAGAAGAAGCGGATTCAATTCCACAAGTTGCCGTATCTTTTGAAGAGGCGCTAGCAGCCCTTGATAA
AGACAGAGAGTTCCTTCTTCACGGTGACGTGTTCTCGAACTCTTCAATTGATGCTTTTATTAAACTTAAAAAAGCAGAGT
GTGAAGCCGTTTCACAAGCAACACATCCAAAAGAGTTTGAATTGTACTACAGCGTATAA

Protein sequence :
MSVKTAQDVLDLIQEQDVKFVDLRFTDTHGKEQHVSVPFHQVTEDFFEDGKMFDGSSIAGWKGIQDSDMILMPDPSTAVI
DPFTDELTLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYMRSTGLADTILFGPEPEFFLFDDVRYSNSINGAFYAIDAKEA
SWNSGTVYEEGNTGHRPGIKGGYFPVSPVDSGQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTIVKKADELQ
IYKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLAKDGVNLFSGDLYGGLSQMALYYIGGIIKHAKAINAYTNAST
NSYKRLIPGFEAPVMLAYSAGNRSASIRIPVVPSPKASRIEVRFPDPTMNPYLGFSVMLMAGLDGIKNKIDPGEALDKDL
YDLPQEEADSIPQVAVSFEEALAALDKDREFLLHGDVFSNSSIDAFIKLKKAECEAVSQATHPKEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-98 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_01250 YP_007639030.1 glutamine synthetase VFG1399 Protein 9e-111 50