Gene Information

Name : PCNPT3_12525 (PCNPT3_12525)
Accession : YP_007641279.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Unknown
Product : replicative DNA helicase DnaB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2968824 - 2970224 bp
Length : 1401 bp
Strand : +
Note : COG0305 Replicative DNA helicase

DNA sequence :
ATGGCAGATAAAGCCCTTTATAAAACATCAAAGAAGCAACCCTTATCAAGCACTAAAACGGTGCCTCATTCTTTTGAAGC
AGAGCAAGCGATCATTGGTGGCTTATTGCTCAAAAATGATGCCTGGAATGATGTTGCGGAGCGTGTTGTTGAACGTGATT
TTTATCATCGCGCGCATCGCACTATATTTGCAACGATTGAGAAACTAAGCAGTGAAGATGTACCCGTTGATCTGGTGACC
CTCTCTGAATCACTCGAAAATAACCAAGTATTAGAAACAGTAGGTGGTATTGCCTATCTTGCCGAGTTATTACAAAATAC
GCCAAGTGCCGCTAACATTAACAATTATGCGGATATTGTTCGTGAGCGCGCTATTGTCCGAGAATTAATTGGAGTCGCCA
ATGAAATCGCAGAAGCCGGTTATGAAACAGAAGGCCGTAATAGTGCTGATTTACTCGACTTTGCAGAGACAAAAGTTTTC
CAAATTGCAGAAGCAAGACAAAATAAAAGTGAGGGCCCACTGCCCATTAAAGATATCTTAAAAGCCACCGTGGCTAAAAT
TGATGATCTTTGCAAAAACCCTCGTGATGGCATTACCGGCCTCTCTTCTGGATACAATGATTTAGACCAAATGACCACAG
GATTTCAGCCTGGCGATTTAATTATTGTGGCGGCGCGTCCTTCTATGGGCAAAACAACGTTTGCCATGAATATGGCAGAA
TACGCAGCCCTCAACTCTGACAAGCCCACACTCATATTCTCGCTCGAAATGCCAGCTGAGCAAATCATGAATCGTATGCT
TGCCTCTTTGGGACGTATTGATCAAGGTAAAATCAGGACTGGTCAACTTGACGAAAATGACTGGGCTTCATTATCTTCAA
CCATGTCTATTTTACTCAACAAAAGTAAAATGTTTATTGATGACAGTTCAGGCCTCACCCCTACAGAGTTACGTGCGCGA
GCGCGCAGAATTGCACGCGATCATAATGGTATCGGCTTAATTGTTATCGATTACCTACAACTCATGCGCGTCCCATCTTT
AAGTGAAAACCGAACATTAGAAATCTCAGAAATATCTCGCTCCTTAAAAGCACTGGCGAAAGAACTACGATGCCCAGTGA
TAGCACTGTCACAACTTAACCGTGGTCTAGAGCAACGTGCCGATAAACGCCCTATTAACTCAGATTTACGTGAATCCGGA
GCGATTGAGCAAGATGCTGATTTAATTATGTTTATTTACCGTGATGAAGTCTATAACGATGACAGTAACGATAAAGGTAT
CGCGGAGATTATTATCGGTAAGCAACGTAATGGACCGATTGGTAAAATTCGCTTAACCTTCCAGGGGCGCTATTCACGTT
TTGATGATTATACGGGTACGGCTTACCACGGAGAAGATTAG

Protein sequence :
MADKALYKTSKKQPLSSTKTVPHSFEAEQAIIGGLLLKNDAWNDVAERVVERDFYHRAHRTIFATIEKLSSEDVPVDLVT
LSESLENNQVLETVGGIAYLAELLQNTPSAANINNYADIVRERAIVRELIGVANEIAEAGYETEGRNSADLLDFAETKVF
QIAEARQNKSEGPLPIKDILKATVAKIDDLCKNPRDGITGLSSGYNDLDQMTTGFQPGDLIIVAARPSMGKTTFAMNMAE
YAALNSDKPTLIFSLEMPAEQIMNRMLASLGRIDQGKIRTGQLDENDWASLSSTMSILLNKSKMFIDDSSGLTPTELRAR
ARRIARDHNGIGLIVIDYLQLMRVPSLSENRTLEISEISRSLKALAKELRCPVIALSQLNRGLEQRADKRPINSDLRESG
AIEQDADLIMFIYRDEVYNDDSNDKGIAEIIIGKQRNGPIGKIRLTFQGRYSRFDDYTGTAYHGED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-101 51
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-100 50
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-99 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-99 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-98 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-93 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-93 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-87 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 8e-82 45