Gene Information

Name : PCNPT3_12175 (PCNPT3_12175)
Accession : YP_007641209.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2881304 - 2882263 bp
Length : 960 bp
Strand : -
Note : COG0463 Glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGAAAAGAGTTTCTATTGTTATCCCTTGCTTTAATGAAAGTGAGGTTATAGATACCACCGTTGCAGAATTGATATCGGT
AACACAGGGGATCAAAAATTATGAATTTGAGCTGATTTTTGTCAATGATGGTAGTTCTGATGATACAGAGAAAAAATTGC
TGGCGCATAGTAAACGTTATAACAATGTACGTACTATTTCATTTTCACGTAACTTTGGTCACCAACAAGCAGTGAGCGCC
GGTTTAGATGTTAGTACGGGTGATGCTGTGGTTTTGATCGATGCTGATTTGCAAGATCCTCCAAAAGTTATTGCAGAAAT
GATAATAAAGTGGGAAGAAGGTTTCGATGTTGTTTATGGAACAAGAGCAAGTCGTGAAGGTGAATCGTGGTTTAAGCTTC
TCACCGCGAAAAGTTTTTATAGAATATTAAACTATTTGTCAGAGGTTAAAATTCCACTTGATACGGGTGATTTTCGTTTA
ATGGACAGGCAGGTTGTTGATCATTTAATAGCAATGCCGGAAAAATCTCGATTTATTAGAGGTATGGTCAGTTGGATTGG
TTTTAATCAAACGGCAATCAGTTATAAACGCTCTGCACGTTTTGCGGGTGAATCTAAATATCCGTTAGCAAAGATGCTTA
AATTTGGCATCGACGGCATTTTATCCTTTTCAGTTAAACCGTTAAAATTATCGATTATGATGGGCTTTGCATGTTCAGGG
GTTGCGATGCTGATGTTACTGTATTCAGTATATATTCGCTTGATGACGGATCATTGGGAGACTGGCTGGACCTCAATATT
AGTCTCTATTTTATTTATGGGGGGAGTACAACTGATTTCTATCGGTATTCTGGGTGAATATGTCGCGCGAATTTATAACG
AATCCAAGCAGCGTCCGCTGTATATTATCAAGCAACAAAGAGAAGTGGATGTTCAAGAAACAGACTCAATTACTAAGTAA

Protein sequence :
MKRVSIVIPCFNESEVIDTTVAELISVTQGIKNYEFELIFVNDGSSDDTEKKLLAHSKRYNNVRTISFSRNFGHQQAVSA
GLDVSTGDAVVLIDADLQDPPKVIAEMIIKWEEGFDVVYGTRASREGESWFKLLTAKSFYRILNYLSEVKIPLDTGDFRL
MDRQVVDHLIAMPEKSRFIRGMVSWIGFNQTAISYKRSARFAGESKYPLAKMLKFGIDGILSFSVKPLKLSIMMGFACSG
VAMLMLLYSVYIRLMTDHWETGWTSILVSILFMGGVQLISIGILGEYVARIYNESKQRPLYIIKQQREVDVQETDSITK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-51 43
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 8e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_12175 YP_007641209.1 family 2 glycosyl transferase VFG0670 Protein 5e-51 43