Gene Information

Name : PCNPT3_12135 (PCNPT3_12135)
Accession : YP_007641201.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2870390 - 2871061 bp
Length : 672 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGCATGAATTTGTTATTGAAACACGCGCTATGAGTAAAAGGTTTGGCAATGTATTGGCGTTAGATAATCTAGATATACA
GATAAAAAAAGGGGAGTTTGTTGCCTTTATGGGGGCCTCTGGCTCAGGAAAAACAACCTTACTGAACATTTTAAGTTGTT
TGGATGTACCGAGTAGTGGGCAAGTCATTTTAGATGGCATTGATGCTGGTAGCTTAGATGAGGATAGCCAGCGCCAATTC
AGGGCAAATAAAGTGGGCCTGATTTTCCAGCAATTCCATCTTATTCCGTACTTAAATGTACTTGAAAATATTATGTTAGC
ACAACATTACCACAGCGTTGTCGATGAGCGCGCCGCGCGTAAAGTATTGCAACATGTAGGCCTGTCGCACCGCGAAACGC
ATTTACCTAAACAGTTGTCTGGTGGTGAGCAGCAACGTGCTTGTATTGCGCGTGCGCTTATTAATGAGCCACCCATTATC
TTTGCAGATGAGCCAACCGGTAACTTAGATGAAGAAAATGAGAAGCGCATATTAGCCATGTTAAAAGATCTCAATAAGGC
GGGGCGCACCATTATTATGGTGACGCATAACCCTGAATTGGGCGCACAAAGCGATCGCATTATTACATTGCAGCACGGCA
AAATAATGAGTGAGGTAAAAAACAGTGCGTAA

Protein sequence : 
MHEFVIETRAMSKRFGNVLALDNLDIQIKKGEFVAFMGASGSGKTTLLNILSCLDVPSSGQVILDGIDAGSLDEDSQRQF
RANKVGLIFQQFHLIPYLNVLENIMLAQHYHSVVDERAARKVLQHVGLSHRETHLPKQLSGGEQQRACIARALINEPPII
FADEPTGNLDEENEKRILAMLKDLNKAGRTIIMVTHNPELGAQSDRIITLQHGKIMSEVKNSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_12135 YP_007641201.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-41 47
PCNPT3_12135 YP_007641201.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-37 43
PCNPT3_12135 YP_007641201.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-34 43
PCNPT3_12135 YP_007641201.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-37 42