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Name : PCNPT3_11920 (PCNPT3_11920) Accession : YP_007641158.1 Strain : Psychromonas sp. CNPT3 Genome accession: NC_020802 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2818448 - 2819965 bp Length : 1518 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCAGAGAAAAATCAAAGTGAAGCACCTACAGTAGAGCTAAGTGAAATTTTAGCGCAACGTTTAGCAAAGCTTGATGC TATGCGTGAAAAGGGTAATGCATTTCCAAACGATTTCCGTCGTAAAAATATTTCTGATGAATTACATGAAAAATATGATG ATAAAACAAAAGAAGAATTAGACGAACTTGCTGTTGATGTGAGTATCGCGGGTCGAATGATGACGCGTCGTATTATGGGT AAAGCTAGTTTTGCAACCATTCAAGATATGGGCGGACGTATTCAAGTTTACGTGGTGCGTGATAACCTGGCTGTTGATTT TTATAATACTGAATTTAAGAAATGGGATCTTGGCGATATAATTGGCGCGCAAGGGCGTCTATTTAAAACTAAAACCAATG AACTGAGTATTAAAGTTTCAGAAATTCGTATTCTGACTAAGGCGCTACGCCCATTACCAGATAAGTTCCATGGTTTAACC GATATTGAGTCACGCTATCGTCAACGTTATTTAGACTTGATCGCCAATGATAACTCTCGTCGTACTTTCATACTGCGCAA TAAAATCGTTAACTCTATCCGTCAGTACCTAAATGACCGTGATTTTATGGAAGTTGAAACGCCAATGTTACAAGCTATAC CTGGCGGCGCAACGGCGAAACCATTTGAAACTTTCCATAATGCACTTGATTTACCGATGTACTTACGTATTGCACCAGAG CTTAATTTAAAACGTTTAGTGGTTGGTGGTTTTGAACGTGTATTTGAAATAAATCGCAGTTTCCGTAATGAAGGTACTTC TACTCGCCATAATCCTGAATTTACGATGATAGAATTTTATCAGGCATATGCAGATTACATCGATTTGATGAACCTTACTG AAGATATGTTACGCCATATTACAGAAACAGTATTAGGCTCAAGCGTTGTTAAATATGGTGAAGAAGAATTTGATTTTGGA AAACCATTTATTCGCATGACCATGAAAGAGTCAATTCTTGAGTACAATGATGAGATAAAAGCAGAAGAGTTAGATAGCAT GGAAGCACTACAAGCGCTTGCGAAACGTTTAAACATTCATCTGAAAGATAATTGGGGTGCGGGTAAAGTTCTGACTGAGA TCTTTGAAGAAACAGCAGAGCATAAACTAATGCAACCTACCTTTATTACGGCTTACCCTGCAGAGGTTTCTCCTCTTGCA CGTCGTAGTGATAATGATCCTGATGTGACAGATCGTTTTGAATTCTTTGTAGGTGGTCGTGAGCTTGCAAATGGTTTCTC AGAGCTAAATGACGCACAAGATCAAGCGCAACGTTTTAGAGATCAAGTGGCACAAAAAGATGCTGGTGATGATGAAGCGA TGTTCTATGATGCAGATTACATTGTTGCTTTAGAGCATGGTCTACCACCAACAGCGGGAGAAGGCATCGGTATTGATCGC TTAGTCATGCTGTTTACAGATAGCCATACTATCCGTGACGTATTGTTATTCCCGCATATGCGTCCACAAAATAAATAA Protein sequence : MSEKNQSEAPTVELSEILAQRLAKLDAMREKGNAFPNDFRRKNISDELHEKYDDKTKEELDELAVDVSIAGRMMTRRIMG KASFATIQDMGGRIQVYVVRDNLAVDFYNTEFKKWDLGDIIGAQGRLFKTKTNELSIKVSEIRILTKALRPLPDKFHGLT DIESRYRQRYLDLIANDNSRRTFILRNKIVNSIRQYLNDRDFMEVETPMLQAIPGGATAKPFETFHNALDLPMYLRIAPE LNLKRLVVGGFERVFEINRSFRNEGTSTRHNPEFTMIEFYQAYADYIDLMNLTEDMLRHITETVLGSSVVKYGEEEFDFG KPFIRMTMKESILEYNDEIKAEELDSMEALQALAKRLNIHLKDNWGAGKVLTEIFEETAEHKLMQPTFITAYPAEVSPLA RRSDNDPDVTDRFEFFVGGRELANGFSELNDAQDQAQRFRDQVAQKDAGDDEAMFYDADYIVALEHGLPPTAGEGIGIDR LVMLFTDSHTIRDVLLFPHMRPQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-142 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCNPT3_11920 | YP_007641158.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-142 | 60 |
