Gene Information

Name : PCNPT3_11615 (PCNPT3_11615)
Accession : YP_007641097.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2738814 - 2741333 bp
Length : 2520 bp
Strand : +
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGATGCAACAGTTTTTAACTATCAAAAGTGAAGTGCCTGATACCCTGCTCTTTTATCGTATGGGCGACTTTTACGAAAT
GTTTTTTGATGATGCCCGTAAAGTTTCGCAATTATTGGGAATTTCATTAACTCAACGTGGAAAAACAGGTGGTAATGCCA
TTCCGATGGCAGGAGTACCTTATCATAGTGTAGAAGGTTATTTAGGCAAATTGCTCGCCTTAGGAGAGTCGGTTGCCATT
TGTGAACAAATCGGCGATCCCGCGACCTCTAAAGGTCCCGTCGATAGAAAAATAGTACGCATTATTACGCCCGGGACAAT
AACCGATGAAGCCTTGCTCGATGATCGCCAAGATAACTTGCTATGCGCGCTATACCAACAACAAAACAATTTCGGGATTG
CCTCTTTAGATATCAGTAGTGGCCGTTTTGTTATTAACCAATTTCAACATGAAGAAACCTTACAAGCTGAACTACAACGT
TTAAATCCTGCAGAATTACTCTATGTAGAGACTTTTGAAGCATTACATTTAATTGAACATTTACCGAGTACTCGCCGCCG
CCCTGAGTGGGAATTTGATTTGGGTACTGCGCGAAAAACACTAAATCAACAGTTTTCAACGCAAGATCTGGTCGGTTTTG
GTGTTGATAAAGCCGAATTTGCCCTTTGTGCAGCTGGCGCATTACTGCAATATATAAAAGATACACAGCGTACTAGTCTG
CCACATTTACAAAGTATTAAATTAGAGCAAACAATTGATACAGTGATCTTAGATGCTGCCACCCGTAAGAATTTAGAGTT
AACCCAAAATTTAAGTGGTGGAACGGATCATACTTTAGCGCAAATTTTAGATGTCAGCGTCACCCCGATGGGGAGTCGTT
TATTAAAACGCTGGATCCACCAACCCATTCGTAACGTCAACATTTTAAATTACCGACAAACAATGATCCAAACATTGATA
GATTTGGATCTGTGTAATGCATTAGCAGAGCCCCTTAAACAAATCGGGGATATTGAGCGAGTGATAGCGCGTTTAGCACT
GCGCTCGGCACGCCCTCGAGATCTCACTCGTTTACGTAGCGCTTTTGCATTGTTGCCTGAGTTACAAAATCTACTCGCCG
AACTGCCTCACGAACTAGTGCATAAATTAAGCACTGAAATGGGTAACTACCCAGAACTACTTACCCTGTTAGAAAATGCG
ATTATCGATAACCCTCCCGTGATCATTCGCGATGGTGGCGTGATAGCACCTGGGTATAACAGTGAGCTTGATGAATGGCG
TAATTTAGCGAAAGGTGCAACGGATTATCTTAAAGAATTAGAGATAAGAGAGCGAGAATCTACGGGTATATCTACTTTAA
AAGTCGGTTATAACCGCGTACATGGCTATTACATTGAAACCAGTCGCCATGCAGCAGATGCCGTTCCCGCACATTATGTA
CGCCGTCAAACATTAAAAAATACCGAGCGTTATATTATTGCAGAGCTCAAAGAGCACGAAGATAAAGTGTTGGTCAGCCA
AGGCAAAGCATTAGCACTTGAAAAGAAATTGTATGCACAATTAATTGAGCAATTATTGCCTTATTTAAAAGCACTACAAT
TTACGGCGCAATCACTCGCTGAGCTAGATGTTTTAAATACACTTGCAGAGCGCGCATTAACACTTAATTACGTGCGCCCA
ACACTGTCACCTGATCGGGGCATTATCATTACAGACGGACGCCACCCTGTCGTAGAGCAAGTGAATAAAACACCCTTTAT
TGCGAACCCTGTGGCACTTGCAGATGATCGGCGTATGTTAATTATTACCGGCCCCAATATGGGAGGTAAATCAACCTATA
TGCGCCAAGTCGCATTGATTGTCTTAATGGCACATATTGGTAGTTTTATTCCGGCGCAAAGTGCAACCATTGGTCCGGTT
GATAGAATATTCACCCGTATTGGCGCATCGGACGACCTTGCCAGTGGACGCTCTACTTTTATGGTAGAGATGACAGAAAC
GGCTAATATATTACATAATGCAACCAAAAACAGTTTAGTACTCATGGATGAAATAGGCAGAGGAACCAGTACGTTTGATG
GCTTATCACTGGCATGGGCATGCGCAGAAGAGCTTGCTCTTAAAATCCAAGCCTACACCCTATTTGCAACGCATTATTTT
GAATTAACTGCGCTTCCCGAAACAATTAAAGAGGTGGTAAATGTACATCTTGATGCGGCAGAAGATGGAGACAACATTAT
CTTCTTACATGCGGTGCATGATGGCGCTGCCAACAAAAGTTACGGTTTACAGGTAGCAGCCCTTGCCGGTGTACCAAGCC
GAGTTGTTAAAAACGCAAAACGTAAATTACAACAATTAGAATTAACGTCGAATAATACAAATATCACCGCGCAGACGCTT
ATGACACCTGTAGAGGAAGTAGAAGAAGATGGCGTGCATCGTTTGCTAAAACAAATAAATCCGGATGAATTGAGCCCAAA
ACAAGCGCTGGCGCTACTTTACCAACTTAAAGAGGCTTAA

Protein sequence :
MMQQFLTIKSEVPDTLLFYRMGDFYEMFFDDARKVSQLLGISLTQRGKTGGNAIPMAGVPYHSVEGYLGKLLALGESVAI
CEQIGDPATSKGPVDRKIVRIITPGTITDEALLDDRQDNLLCALYQQQNNFGIASLDISSGRFVINQFQHEETLQAELQR
LNPAELLYVETFEALHLIEHLPSTRRRPEWEFDLGTARKTLNQQFSTQDLVGFGVDKAEFALCAAGALLQYIKDTQRTSL
PHLQSIKLEQTIDTVILDAATRKNLELTQNLSGGTDHTLAQILDVSVTPMGSRLLKRWIHQPIRNVNILNYRQTMIQTLI
DLDLCNALAEPLKQIGDIERVIARLALRSARPRDLTRLRSAFALLPELQNLLAELPHELVHKLSTEMGNYPELLTLLENA
IIDNPPVIIRDGGVIAPGYNSELDEWRNLAKGATDYLKELEIRERESTGISTLKVGYNRVHGYYIETSRHAADAVPAHYV
RRQTLKNTERYIIAELKEHEDKVLVSQGKALALEKKLYAQLIEQLLPYLKALQFTAQSLAELDVLNTLAERALTLNYVRP
TLSPDRGIIITDGRHPVVEQVNKTPFIANPVALADDRRMLIITGPNMGGKSTYMRQVALIVLMAHIGSFIPAQSATIGPV
DRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTFDGLSLAWACAEELALKIQAYTLFATHYF
ELTALPETIKEVVNVHLDAAEDGDNIIFLHAVHDGAANKSYGLQVAALAGVPSRVVKNAKRKLQQLELTSNNTNITAQTL
MTPVEEVEEDGVHRLLKQINPDELSPKQALALLYQLKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_11615 YP_007641097.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 66