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Name : PCNPT3_00905 (PCNPT3_00905) Accession : YP_007638961.1 Strain : Psychromonas sp. CNPT3 Genome accession: NC_020802 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 217245 - 218459 bp Length : 1215 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : GTGGCAACCTTCCTATATAAAGCATTAGATGCCAAAGGTAAATCTGTAAAAGGAACCTTAGAGGCTGATTCAGCGCGTTT GTTAAGGCAAAAATTACGTGCGCAAGGTTATATGCCATTGCACGTTGAGGCGGTGAGTCAGCAGTCGAGTCAGAGTAGTA AACGCTTATACCGTTGCAAAATTAAAACGGCAGACTTAGCGCTGATAACACGTCAACTTTCGACTTTAGTGGCTGCCTCT ATTCCGATAGAAGAATGCTTACAAGCGGTATTAGAGCAGTGTGAAAAAGAAAATTTAAAAACGATCATTGCATCGGTGCG TAGCTCGATCATTGAAGGGCACAGTTTAGCTGAGAGTTTAGGCGCCTTTCCCTTTGTTTTTGATCATCTGTTTTGCGCGA TGGTGGCGGCGGGCGAGCGTTCTGGTCACCTTGATAAAGTATTAGATAAGCTTGCCGATTATGCAGAGCAACGCCAAGCA ATGAAAAGTACTATCCAGCAAGCGATGATTTATCCCTTAGTATTAACGTTTGTGGCGGTCGGCGTTATCTCGATATTATT AACATCAGTTGTACCGCAAGTGGTCGGCCAGTTTGAGCACATGGGGGCAGATTTACCGGCAACCACACGATTCTTGATAA CAATCAGTGATGCACTGCGCGCTTATGGTTTGTATTTGATGGGGGCGCTTTTTATCTGTCTACTGGGCATAAAACAGTAC TTAAGAAAAGAAAGTAACCAGCTAAAATTTGCTCAACATTTATTACGTATACCGGTGATTGGCAATGTGTCTAAAGGCTT AAATACAGCGCGTTTTGCGCGGACATTAAGCATTTTAAATAGCAGCGCTGTGCCGTTGCTTGAGGCGATGGGTATTGCGG GAAATGTGCTCAGTAATGCATTTATACGCTTACGAGTTGCAGAGGCGACAGAGCGTGTACGCTCTGGCGTGAGCCTAGGA CGGGCACTTACTAATACAAAATTATTTCCACCGATGATGCTACATATGATTGCCAGTGGTGAGCGTAGTGGTGAGTTAGG GAATATGTTAGCGCGCTCTGCGGATAATCAAGATAAACAATTTGCGGCGCAAGTGACGATTGCTATTGGTTTATTTGAAC CTGCATTGATTATTTCAATGGCGGGGGTGGTTCTGTTTATTGTGATGGCAATACTCGAACCGATACTACAACTCAATAAT TTAGTTTCTGCTTAA Protein sequence : MATFLYKALDAKGKSVKGTLEADSARLLRQKLRAQGYMPLHVEAVSQQSSQSSKRLYRCKIKTADLALITRQLSTLVAAS IPIEECLQAVLEQCEKENLKTIIASVRSSIIEGHSLAESLGAFPFVFDHLFCAMVAAGERSGHLDKVLDKLADYAEQRQA MKSTIQQAMIYPLVLTFVAVGVISILLTSVVPQVVGQFEHMGADLPATTRFLITISDALRAYGLYLMGALFICLLGIKQY LRKESNQLKFAQHLLRIPVIGNVSKGLNTARFARTLSILNSSAVPLLEAMGIAGNVLSNAFIRLRVAEATERVRSGVSLG RALTNTKLFPPMMLHMIASGERSGELGNMLARSADNQDKQFAAQVTIAIGLFEPALIISMAGVVLFIVMAILEPILQLNN LVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-98 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-98 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCNPT3_00905 | YP_007638961.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-94 | 54 |
| PCNPT3_00905 | YP_007638961.1 | general secretion pathway protein F | VFG0181 | Protein | 9e-85 | 49 |
| PCNPT3_00905 | YP_007638961.1 | general secretion pathway protein F | VFG1870 | Protein | 8e-78 | 42 |
