Gene Information

Name : PCNPT3_08470 (PCNPT3_08470)
Accession : YP_007640470.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Unknown
Product : type VI secretion system effector
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2004770 - 2005288 bp
Length : 519 bp
Strand : +
Note : COG3157 Hemolysin-coregulated protein (uncharacterized)

DNA sequence :
ATGCCAACTCCTTGCTATATTTCAATCGAAGGTAAAACTCAGGGTAATATTACTGCGGGTTCATTTACATCTGACTCTGT
CGGTAATATTTATGTCGAAGGTCATGAAGATGAGATGTTAGTGCAAGCATTTGATCATATTGTAACTGTACCAACAGATC
CTCAATCCGGTCAACCTTCGGGTCAACGCATCCACAAACCATTCAAATTTACTGTCGCATTAAATAAATCAGTCCCATTG
ATGTATAACGCATTGGCGTCTGGTGAAATGTTGCCAAAAATAGATCTTAAATGGTATAGAACATCAGTTGAAGGTAAACA
AGAACATTTCTTTTCAACTATATTAACAGATGCAACAATTATCGACATAAACTGTCAAATGCCCCATTGTCAAGATGTAA
CAAAAGCTGATTTCACCCAACTTATAACTGTTTCTGTATCATATCGAGCCATTAATTGGGATCATAAAATATCAGGAACA
TCTGGATCTGACGATTGGCGCAAACCTATATCTGCATGA

Protein sequence :
MPTPCYISIEGKTQGNITAGSFTSDSVGNIYVEGHEDEMLVQAFDHIVTVPTDPQSGQPSGQRIHKPFKFTVALNKSVPL
MYNALASGEMLPKIDLKWYRTSVEGKQEHFFSTILTDATIIDINCQMPHCQDVTKADFTQLITVSVSYRAINWDHKISGT
SGSDDWRKPISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 1e-63 76
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-63 76
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 2e-46 57