Gene Information

Name : PCNPT3_07910 (PCNPT3_07910)
Accession : YP_007640358.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : Sialic acid-induced transmembrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1865409 - 1866569 bp
Length : 1161 bp
Strand : -
Note : COG3055 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGAACAAGCAGAAATTATCCAAAGTATTTACACCTTTAATTGCTACTTTTATTTTGATGGCAACACCCGTTGTTGCTAA
AGATCTTTGGCCTGATTTACCGGTAGGGGTGAAAAGTGGTGTCAGTGCTCAAATGGGAGATAAGTTATTTGTTGGTTTGG
GCTCTGCCGATACGAATTTTTATATGCTTGATCTTAAAGATATTAAAAAAGGCTGGCAGAAGCGTGCTGAATTTATAGGC
CAACCTAGAAGTGGTGCAACGGCATCGGTTGTGGGGGGCGATATTTATATTTTTGGTGGCTCAGGTAAAATAAAATCAAC
GGATGCAGCACCTATTTTGTTCGATACGGTATACCGTTATAACGCCTCATCAAATACGTGGTTAAAAATACAGACAACAT
CACCCGTTGGTTTATTGGGGGCTGCTTCTTATTCTCCTGATGATCATCAAGTTGTTTTCTTCGGTGGTTACAATAAAACG
TATTTTGATACCTACCTTGCAGATATCAATGCGACGAACAAAAAAGAACAGCCTAAAAAATGGCAGAAAATTGTTGATGA
TTACATGGGAATGGAACCGCTTGAGTATAAATGGAATCGTAATGTGCTCAGTTATTCACCAAAAACTAACGAATGGATGG
AATTAGGCGCTGTGCCTTATATTCCAAATTGTGGATCTACTTTACTTGTTCAAGGTCCCAATGCCACCATCATTAGTGGT
GAAATAAAGCCTGGATTAAGAACTGAAAAAGTGAAGCAATATCATTTTGGTCAATCTAAACCGTGGACAAATTTACAATC
GTTACCTGCGCCTAAAGGAAGCGATGTACAAGAGGGACTTGCTGGCGCATTTTCAGGCATGAGTAATGGTGTGATGATTG
TTGCTGGTGGCGCAAATTTCCATGGCGCTAAGCTCGCTTACAAACAAGGTAAAATGTTCGCTCATAATGGTTTTGGAAAA
GCGTTTAATGCAGAAACTTATGTACTCAAAGGAGATGAGTGGCTTCAATCAACTAATTTACCAGAAGGTTTAGCTTACGG
AGCCTCTTTTACGATTGATCAAGGTGTACTTGTGGTTGGTGGTGAAGATAGCCAACGTTCTGCGCGTAAAGATGTTTATT
TAATGTCTTGGGATGGTTCATCTGTCCACATATCAAATTAA

Protein sequence :
MNKQKLSKVFTPLIATFILMATPVVAKDLWPDLPVGVKSGVSAQMGDKLFVGLGSADTNFYMLDLKDIKKGWQKRAEFIG
QPRSGATASVVGGDIYIFGGSGKIKSTDAAPILFDTVYRYNASSNTWLKIQTTSPVGLLGAASYSPDDHQVVFFGGYNKT
YFDTYLADINATNKKEQPKKWQKIVDDYMGMEPLEYKWNRNVLSYSPKTNEWMELGAVPYIPNCGSTLLVQGPNATIISG
EIKPGLRTEKVKQYHFGQSKPWTNLQSLPAPKGSDVQEGLAGAFSGMSNGVMIVAGGANFHGAKLAYKQGKMFAHNGFGK
AFNAETYVLKGDEWLQSTNLPEGLAYGASFTIDQGVLVVGGEDSQRSARKDVYLMSWDGSSVHISN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0022c ACA01839.1 conserved hypothetical protein Not tested VPI-2 Protein 1e-116 61
VC1774 NP_231409.1 N-acetylneuraminic acid mutarotase Not tested VPI-2 Protein 9e-116 61
VC0395_A1372 YP_001217315.1 N-acetylneuraminic acid mutarotase Not tested VPI-2 Protein 9e-116 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_07910 YP_007640358.1 Sialic acid-induced transmembrane protein VFG1107 Protein 4e-116 61