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Name : PCNPT3_06920 (PCNPT3_06920) Accession : YP_007640160.1 Strain : Psychromonas sp. CNPT3 Genome accession: NC_020802 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : - COG ID : - EC number : - Position : 1639957 - 1641258 bp Length : 1302 bp Strand : - Note : COG1593 TRAP-type C4-dicarboxylate transport system, large permease component DNA sequence : ATGGATTGGACTGTGATCGTTACTTTATTTGGCAGTTTTGCTGTGATGTTGGCATTAGGCGTTCCTGTGTCATTTGCAAT AGGTTTATCGTCGCTTGCAACCATTATGCTCTCTCTGCCGTTTGATCCTGCTATCACCGTGATCGCCCAAAAGATGGCAT CCGGTTTAGACAGCTTTGCGTTATTGGCTATCCCGTTTTTTATCTTAGCGGGCAATATAATGAATCAAGGTGGCATCGCG TTACGCTTGATACGATTTGCACAAGTGATAGTGGGGCGCCTACCGGGTAGCCTTGCGCATTGTAATATCCTTGCCAATAT GATGTTTGGCTCTATCTCAGGCTCAGCCGTTGCATCGGCTGCCGCAGTAGGTGGCACAATGGCGCCCTTACAAAGAGAAG CCGGTTATGATGATGCCTTTTCAACGGCGGTTAATATCACTTCATGTCCGACCGGGTTATTAATTCCACCAAGTAATACC TTCATTGTGTATTCGTTAGTATCAGGTGGTACATCTATTGCCGCTTTATTTTTAGCCGGTTATATCCCAGGTATTTTAAT GGGCTTAAGCCTGATGGTCGTTGCGGGGGTGATTGCGAAAAAAAGGGGCTATCCTTTATCGCCTAAAGCCAGCATGAAAG AGATCATGTTAAAAACCATTGATGCGATGCCTTCTTTAATGCTGATTGTTATTATTATGGGTGGCATTATCGGTGGCGTT TTTACGGCAACAGAAGCGTCAGCGATTGCCGTTATGTATACCTTTATCTTAGCGGTGGTTATTTATAAAGAAGTTAAAAT AAGTCAATTACCTAAAATAATTTTAGAGTCCACGGTAACAACGTCTATCGTGCTGTTATTGATTGGTGCCTCTATGGGCA TGTCTTGGGCGATGGCTAACGCCGATATCCCTTATATGATCAGCGACAGTTTACTTAACTTATCAGATAATCCTATTGTG ATCATGCTCGCCATTAATATTATTTTATTAATTGTGGGTGTGTTTATGGATATGACGCCCGCTTTACTTATTTTCACCCC TATTTTCTTACCCATTGCGTTAGATCTCGGTATTGATCCCGTGCATTTTGGGGTAATGATGACCTTTAACCTTTGTATCG GCATATGTACACCACCGGTAGGTAGCGCCTTATTTATTGGTTGCTCGGTGGGTCAAGTCTCTATAGATCGCGTGATAAAA CCCTTATTACCCTTCTACGTTGTGTTATTTATTGCCTTAATGCTGGTGACTTTTATCCCTGATATCAGCCTGTTTTTACC ACGCTTAATTTTAGGTTATTAA Protein sequence : MDWTVIVTLFGSFAVMLALGVPVSFAIGLSSLATIMLSLPFDPAITVIAQKMASGLDSFALLAIPFFILAGNIMNQGGIA LRLIRFAQVIVGRLPGSLAHCNILANMMFGSISGSAVASAAAVGGTMAPLQREAGYDDAFSTAVNITSCPTGLLIPPSNT FIVYSLVSGGTSIAALFLAGYIPGILMGLSLMVVAGVIAKKRGYPLSPKASMKEIMLKTIDAMPSLMLIVIIMGGIIGGV FTATEASAIAVMYTFILAVVIYKEVKISQLPKIILESTVTTSIVLLLIGASMGMSWAMANADIPYMISDSLLNLSDNPIV IMLAINIILLIVGVFMDMTPALLIFTPIFLPIALDLGIDPVHFGVMMTFNLCIGICTPPVGSALFIGCSVGQVSIDRVIK PLLPFYVVLFIALMLVTFIPDISLFLPRLILGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-56 | 42 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-56 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-56 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCNPT3_06920 | YP_007640160.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 1e-56 | 42 |
