Gene Information

Name : PCNPT3_06740 (PCNPT3_06740)
Accession : YP_007640124.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1577029 - 1577718 bp
Length : 690 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGTGAAGAATTATTAGTGTGTAAGGGACTTTTTAAAACCTATGAAGATGGAAGCTTTAGCTCTCAGGTTTTAAAAGG
CGTTGATTTAAGCGTAAAGCAAGGCGAGTTACTGGCGATAGTCGGATCATCCGGCTCAGGTAAAAGTACATTACTGCATC
TACTTGGCGCATTAGATAAGCCAAGCCAAGGCGATGTTTATTATCAAGGGCAAAATATTCATCATTGGAAAGATAACAAA
CAAGCGAAATGGCGCAATCAGCAACTGGGTTTTATTTATCAATTTCATCATTTACTCTCTGAATTTTCGGCTTTAGAAAA
TGTTGCCATGCCACTTTTAATTGCAGGCATGAGTATTAAAGAGGCGACCCAAAAATCACAAGATATGTTACACCGTGTTG
GCCTTGAGGCGCGCGTTAACTATCGACCAGCAAAACTCTCAGGTGGCGAGCGTCAACGCGTGGCAATTGCGCGCGCGCTT
ATCAACGATCCTCAATTAGTGTTGGCGGATGAGCCAACGGGAAATTTAGACGCGCTAAGCGCCGAAAGCGTTTATCAATT
GTTACGTAGTTTAAATGCCGAATTAGGCACTGCTTTTGTGGTGGTCACACATGATTTAGCGCTGGCAAATAAACTCGATA
GAGTCGAGCTAATGGTTAACGGTATATTACAAGGTAAACGCGATGTTTAG

Protein sequence : 
MSEELLVCKGLFKTYEDGSFSSQVLKGVDLSVKQGELLAIVGSSGSGKSTLLHLLGALDKPSQGDVYYQGQNIHHWKDNK
QAKWRNQQLGFIYQFHHLLSEFSALENVAMPLLIAGMSIKEATQKSQDMLHRVGLEARVNYRPAKLSGGERQRVAIARAL
INDPQLVLADEPTGNLDALSAESVYQLLRSLNAELGTAFVVVTHDLALANKLDRVELMVNGILQGKRDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_06740 YP_007640124.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 5e-34 44
PCNPT3_06740 YP_007640124.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 5e-40 43
PCNPT3_06740 YP_007640124.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 2e-35 41