Gene Information

Name : PCNPT3_06335 (PCNPT3_06335)
Accession : YP_007640045.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1491341 - 1493512 bp
Length : 2172 bp
Strand : -
Note : COG2183 Transcriptional accessory protein

DNA sequence :
ATGCCTGCTATTACTCAAACGCTACATCGACAATTGCAACTTAGTGTTCCTCAAATCAATGCGTTTATCCAACTTTATGA
TGCCGGTAATACCGTGCCTTTTATTGCGAGGTATCGTAAAGAGGCAACCTATGGTCTTGACGATACGCAGCTACGCCAGC
TTGAGAGTAGTTTACTTTATCAAAGAGATTTAGCAGAGCGTAAAGAGGCTATTTATAAAAGTTTACTCTCCCAAAACAAA
TTGAGTGCAGCCTTAAAAACGCAAATTATTAACATCGATAATAAACGCGATCTAGAAACCTTGTATCAACCCTTTAAAAG
CAAACGTGTCAGTAAAGCAAAAATTGCGATGGACGCAGGGTTAATGGAACTCGCAGACAAATTATGGTTCCAAGATGACA
TGCAAGCCGATGCTTTATTAAAACGCTACATTAATAAAAAACAGGGTTTTAATGATGAGAAAAGTGTTTTACAAGGTGCC
TCGGACATATTAATAGAGAGACTGAGTTTAGATATCAGCCTAAGTCATAAGCTTGTAGAGACCTTACACAGAAAGGGACT
TTTAAGTAGCTCAGTCATAAAAGCTAAACAACAAGAAGCACAAAAATTTAAAGATTATTTTGACTATAGTGAACGTTTAA
AAACACTGCCAGCACATAGGTACCTTGCGTTGTTACGTGCTAAAAGCGAGGGGTTTTTACGCCTAAAAGTAGACTTTGAT
ATGCACAGCACAGATAAAAAAAGTGTTTATGAAAACCTGATCGCAGATCATTTAGGCTTTTCGTTCGCGCGCTTAAGTAA
AAATAGTTGGCGAAAAAGCATTATTTCAGAAGCGTGGCAAACAAAATTAAATAAACAAACCGAGCGTCAGATTTTTTCTC
TTTTAAAAGAGCAAGCGCATAGCCGTGCCAGCCAACTTTTTGCAACCAATTTAAAAGACCTTTTAATGGCAGCGCCCGCG
GGTGAAAAAATTATATTGGGGTTAGATCCGGGCTTTAAAAGTGGCTGTAAAATTGTGGTGATCAGTGGCACCGGAAAACT
CCTCGATTTTGCGACGATTTATCCTCATGCCCCGCAGCGCCAAAGCGAGTCTGCAAAGAAAAAAGTAGATGAATTTATTA
AAAAGTATCATGTGCAATTAATTGCAATTGGTAATGGCACGGCTTCTCGCGAAAGTGATGATTTTATAAAAAGTGTTTTA
GAAGATGCCTCGCTAAATTTACCTTGTGTGATGGTCAGTGAAGCGGGCGCCTCCGTGTATTCTGCCTCGGAACTGGCGTG
TATTGAATTTCCACAATTAGATGTCTCTATTCGAGGCGCGGTTTCCATTGCTCGAAGGTTACAAGATCCGTTAGCCGAAT
TAGTGAAGATAGATGCAAAAGCTATCGGCGTTGGTTTATATCAGCATGATTTAAATCAGGTTCAATTGGGAAAAAATCTA
CAAGTTGTCGTCGAAGATTGTGTTAATGCTATCGGCGTTGATGTTAACCGTGCGTCGGTGCAATTATTAACCTTTATAGC
TGGATTAAATAAAAGCATTGCTGAAAACATTGTGCAATATCGAGATACGAATGGGCCGTTTACGTCGCGCAGTAGTTTAA
TGAAAGTTCCCCGTTTAGGGGCTAAAGCCTACCAGCAGGCTGCTGGTTTTTTACGCATTATTGAGGGCATTGATCCCTTA
GATAATTCAGCGGTTCATCCTGAGGCTTATGCCTTAGTCAGTCGTATCGCCATCGACCAAAACTGCACGGTAAAAGCATT
ACTAAAAAATAGCCAAGCCTTAAAAATGTTAGACATAGATACCTTTATTAGTGAGCAGTTTGGGCGCTTATCTATTGAAC
AAATTATCTCTGAATTAGCAGCGCCACGGCGTGATCCTCGTCCTGATTTTTGTACGGTAAGTTACAGTGATGAGATCAAT
AAAATCAGCGATCTTTATACGGACATGGAAATTCAAGGCGTGATCACAAATGTGACCAGCTTCGGGGCGTTTGTCGATAT
TGGCGTTCATCAAGATGGCCTTATTCACTTATCCCAACTTGCCAATAAATTTGTAAAAGATCCCTTTGAAGTGGTAAAAA
CCGGACAAATTGTGCAAGTAAGAGTACTCAGTGTGGACAGTGAGCGTAAGCGTATTTCATTAAGTTTACGTTTGCAGGAT
CATAATGCATGA

Protein sequence :
MPAITQTLHRQLQLSVPQINAFIQLYDAGNTVPFIARYRKEATYGLDDTQLRQLESSLLYQRDLAERKEAIYKSLLSQNK
LSAALKTQIINIDNKRDLETLYQPFKSKRVSKAKIAMDAGLMELADKLWFQDDMQADALLKRYINKKQGFNDEKSVLQGA
SDILIERLSLDISLSHKLVETLHRKGLLSSSVIKAKQQEAQKFKDYFDYSERLKTLPAHRYLALLRAKSEGFLRLKVDFD
MHSTDKKSVYENLIADHLGFSFARLSKNSWRKSIISEAWQTKLNKQTERQIFSLLKEQAHSRASQLFATNLKDLLMAAPA
GEKIILGLDPGFKSGCKIVVISGTGKLLDFATIYPHAPQRQSESAKKKVDEFIKKYHVQLIAIGNGTASRESDDFIKSVL
EDASLNLPCVMVSEAGASVYSASELACIEFPQLDVSIRGAVSIARRLQDPLAELVKIDAKAIGVGLYQHDLNQVQLGKNL
QVVVEDCVNAIGVDVNRASVQLLTFIAGLNKSIAENIVQYRDTNGPFTSRSSLMKVPRLGAKAYQQAAGFLRIIEGIDPL
DNSAVHPEAYALVSRIAIDQNCTVKALLKNSQALKMLDIDTFISEQFGRLSIEQIISELAAPRRDPRPDFCTVSYSDEIN
KISDLYTDMEIQGVITNVTSFGAFVDIGVHQDGLIHLSQLANKFVKDPFEVVKTGQIVQVRVLSVDSERKRISLSLRLQD
HNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 6e-168 50