Gene Information

Name : PCNPT3_05420 (PCNPT3_05420)
Accession : YP_007639864.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1272857 - 1273522 bp
Length : 666 bp
Strand : +
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATCCATTTAGAAAATTTAAGCAAATATTACGCCACTAAGCAGGGGCGTCATTATGTATTTAAAAACGTCAATATTAG
CCTGCCGACAGATCGTAATATCGCTATTTTAGGGCCAAACGGTGTGGGGAAATCAACCTTGATCCGCATGATGGGCGGGG
CTGATATGCCAAATCGAGGGCGTATACATTCTAAAAAGAACATTTCATGGCCACTTGGCTTGCAAGGGGGTTTACAAGGC
TCAATGAGTGCGCGTGAAAATGTGCGTTTTGTCGCGCGTATTCATGGTTATAAAAACACCAAAAATATTGAGCAACAAGT
TGAAGACTTTGCTGAAATTGGCAAGTTTTTTGATGAGCCGGTTAAAACATATTCGAGTGGAATGAAGTCGCGTATTACAT
TCGGTTTAACGATGGGGTTTGATTTTGATTTTGATGTGTTACTGATTGATGAGTTAGGTGCAGTGGGGGATGCTAACTTT
CGCAAAAAAAGTGAAAAATTATTATTAGCTAAATATGATAAAACCAAATTAATCATGGTGAATCACTCAATAGGCGAGCT
TAAAAAGTTTTGTGACTCAGGAGTGCTTATTCACAAGCAAAATTTGGTTTTTTTTGAAAACTTAGAGTGTGCCATAAAAG
CGTATCAGGATATTTATGTCAAATAA

Protein sequence : 
MIHLENLSKYYATKQGRHYVFKNVNISLPTDRNIAILGPNGVGKSTLIRMMGGADMPNRGRIHSKKNISWPLGLQGGLQG
SMSARENVRFVARIHGYKNTKNIEQQVEDFAEIGKFFDEPVKTYSSGMKSRITFGLTMGFDFDFDVLLIDELGAVGDANF
RKKSEKLLLAKYDKTKLIMVNHSIGELKKFCDSGVLIHKQNLVFFENLECAIKAYQDIYVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-44 51
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-44 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_05420 YP_007639864.1 polysialic acid transport ATP-binding protein KpsT VFG1449 Protein 8e-45 51
PCNPT3_05420 YP_007639864.1 polysialic acid transport ATP-binding protein KpsT VFG0696 Protein 1e-34 41