Gene Information

Name : XAC29_04315 (XAC29_04315)
Accession : YP_007635346.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1010679 - 1011437 bp
Length : 759 bp
Strand : -
Note : COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

DNA sequence :
GTGAGCAGCTCCGGCCTGCAGCTGCACATCGCCGGCAAACGTTTCGGCACGCGCCAGGTGCTGCGCGATATCGACCTGCA
GCTGGCACCCGGCGAGATCGTCAGCTTGATCGGCGCCAGCGGCTGCGGCAAAAGCACCCTGCTGCGTATCCTGGCCGGCC
TGGAGCGCGACTACGCCGGCGAGGTGGCGCTGGATGGCGCCCGTGTGCGTGGCGTGGACCGGCAGATCGGCTTCATCTTC
CAGGAGCCGCGGCTACTGCCGTGGCTGGATGTGGCCGCCAATGTCGCTTTCGCCGACGAGGCCGATCTATCGCCGGCGGC
CGCGCGGCAATCTGCGCGCGTGCAGCAGTTGCTGGCCCAGGTCGGCCTGCTGGATTACGCAACCGCGCTGCCCAAACAGC
TGTCCGGCGGCCAGGCGCAGCGCGTGGCGCTGGCACGCGGGCTGTACCGGCAACCGCGCGTGCTGCTGCTCGACGAACCC
TTCAGCGCGGTGGATGCCTTCACCCGCATCAAGCTGCAGGACCTGCTGCTGCGCCTGGCCGGCGAACATGGCTTCAGCGT
GCTGCTGGTCACCCACGACATCGACGAAGCGGTCTACCTGAGCGACCGCGTCATCGTCATCGGTGGCCAGCCCGGAACGA
TCGCGCATGCCCAGCGGCTGGAGCTGCCGCGTCCGCGCGATCGCCAGGCGCATGAGGCGGCGCTGCGGCAGGCCCGCCAG
GACCTGCTTGCGGCCTTGCACAGCCTCCATGTGTTCTGA

Protein sequence :
MSSSGLQLHIAGKRFGTRQVLRDIDLQLAPGEIVSLIGASGCGKSTLLRILAGLERDYAGEVALDGARVRGVDRQIGFIF
QEPRLLPWLDVAANVAFADEADLSPAAARQSARVQQLLAQVGLLDYATALPKQLSGGQAQRVALARGLYRQPRVLLLDEP
FSAVDAFTRIKLQDLLLRLAGEHGFSVLLVTHDIDEAVYLSDRVIVIGGQPGTIAHAQRLELPRPRDRQAHEAALRQARQ
DLLAALHSLHVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-38 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_04315 YP_007635346.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-16 41