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Name : XAC29_03540 (XAC29_03540) Accession : YP_007635195.1 Strain : Xanthomonas axonopodis Xac29-1 Genome accession: NC_020800 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 828590 - 830077 bp Length : 1488 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGAGCACTGCGCGCGCCGGCATTTCCTATGCATTCGCCAAGCGTCACGGCGTGGTGCTGCTTGGCAGCGACACCACAGC GCAGATCGGGTTGCGCGAAGGTGGCGATGTGCAGGCCTTGATCGAGTTGCGCCGCGCGTTGGGCCTGCCATTGCAGGTGC GCACGCTGGCGCCGTCGGTGTTCGACCGGCATGTGTCGGAGATCTACGCCGATGCCGGGCTGGAACAAGGCGTGCAGGTG GAAGCGCTGGATCTGCATGGCAGCCTGGATTCGTTGATCGACGACATCCCCACCGCCGATCTGCTCGACAGCCAGGACGA TGCGCCGATCATCCGCCTGATCAACGGCATCATCGCCGAAGCCGCGCGGCTGGGTGCATCCGACGTGCATCTGGAATCCT ACGAATCGCGTTTGCGCGTGCGCCTGCGCGTGGATGGCGTGATGCGCGAGGCAGCCACGCTGCCCGGACGCATCGCACCG CTGCTTGTGTCGCGCGTTAAGGTGATGGCGCGGCTGGATATCGCCGAAAAACGCATCCCGCAGGATGGGCGCGTGTCGCT GGTGATGGGGGCCAAGGCGCTGGATGTGCGCGTCTCCACCTTGCCCACGCGCGGCAGCGAGCGCGTGGTGCTGCGTATTC TGGATAAGGAACAGGGCACGCTGTCGCTGGCGCAACTGGGCATGCCACCGGCGGTGATGCACACCGTGCAGCGTGCCTTG CAGGTGCCCAACGGCATCGTGCTGGTCACCGGGCCCACCGGTTCGGGCAAGACCACGACCTTGTACGCGGCGCTGCGCTT GCTCAACGATGGCTCGCGCAACATCCTCACCGTGGAAGACCCGGTGGAGTACGCCATCGACGGCGTCGGCCAGACCCAGG TCAACGCACGTGTCGGCATGACCTTCGCCGCCGGCCTGCGCGCGATCCTGCGCCAGGACCCGGACGTGGTGATGATCGGC GAGATCCGCGATACCGAGACCGCGCAGATTGCGGTGCAGGCCAGCCTCACCGGCCATCTGGTGCTCTCCACCGTGCACAC CAATGATGCAGTGGGTGCGGTCACGCGGTTGCGCGATATGGGGATCGAGCCGTTTCTGCTGGCATCGAGCCTGCGACTGA TTCTGGCGCAGCGGCTGGTGCGGCGCTTGTGCACGCAGTGCCGCAGTGCACGGCCGATGGACGCTGGGACGGCCCACCTG TTGCGGGCGCCGGCCGATGCAGTGATCTACGCAGCGGCCGGCTGCAACGCCTGCCACCACAGCGGATACGCCGGGCGCGT GGGTATCTACGAAGCGATTGCGGTAGACGATGCGATGCGCCGTTTGATCGGCGACAACGCCGACGAAGACGCACTGGCTG CGGTCGCCTTCGCACGCGTACCGCGGCTGGGCGAAGCGGCACGGGCGGCCGTGCTGCAAGGCCTGACCACGCTGGAAGAA GCGCTGCGTGTGACCCGCCAACAGGACGATGCGCATGCCGCAGTTTGA Protein sequence : MSTARAGISYAFAKRHGVVLLGSDTTAQIGLREGGDVQALIELRRALGLPLQVRTLAPSVFDRHVSEIYADAGLEQGVQV EALDLHGSLDSLIDDIPTADLLDSQDDAPIIRLINGIIAEAARLGASDVHLESYESRLRVRLRVDGVMREAATLPGRIAP LLVSRVKVMARLDIAEKRIPQDGRVSLVMGAKALDVRVSTLPTRGSERVVLRILDKEQGTLSLAQLGMPPAVMHTVQRAL QVPNGIVLVTGPTGSGKTTTLYAALRLLNDGSRNILTVEDPVEYAIDGVGQTQVNARVGMTFAAGLRAILRQDPDVVMIG EIRDTETAQIAVQASLTGHLVLSTVHTNDAVGAVTRLRDMGIEPFLLASSLRLILAQRLVRRLCTQCRSARPMDAGTAHL LRAPADAVIYAAAGCNACHHSGYAGRVGIYEAIAVDDAMRRLIGDNADEDALAAVAFARVPRLGEAARAAVLQGLTTLEE ALRVTRQQDDAHAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-113 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-113 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XAC29_03540 | YP_007635195.1 | type II secretion system protein E | VFG0182 | Protein | 8e-117 | 55 |
| XAC29_03540 | YP_007635195.1 | type II secretion system protein E | VFG1876 | Protein | 4e-114 | 52 |
| XAC29_03540 | YP_007635195.1 | type II secretion system protein E | VFG2048 | Protein | 2e-113 | 51 |
