Gene Information

Name : XAC29_02120 (XAC29_02120)
Accession : YP_007634917.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Virulence
Product : HrcT protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 484765 - 485595 bp
Length : 831 bp
Strand : +
Note : COG4791 Type III secretory pathway, component EscT

DNA sequence :
ATGAACGACGCCACCGATGCCTTGCTGGCCATTTCCTCGCAGGGCGTGTCGCTGTTGACCCTGCTGGCATTGTGCGGGGT
GCGCGTGTTCGTGATGTTCATCGTGCTACCGGCAACGGCGCAGGACAGTCTGCCCGGAATCGCGCGCAACGGCGTGATCT
ACGTCCTGAGCTCGTTCATCGCTTATGGGCAACCGGCCGATGCGCTGGCGAAGATCCAGACGGTCGGCCTGGTCGGGGTG
GTGTTCAAGGAGGCGTTCATCGGTCTGCTGATCGGGTTTGCCGCATCGACGGTGTTCTGGATCGCCGAGAGCGTTGGCTT
GCTGATCGACGACCTTGCCGGTTACAACAATGTGCAGATGACCAACCCGCTCAGCGGCCAGCAAAGCACGCCGGTGTCCA
CGGTGTTGCTGCAACTGGCCATCGTGTCGTTCTACGCGCTGGGCGGCATGTTGATGTTGCTCGGCGCGTTGTTCGAATCG
TTTCGCTGGTGGCCGCTGACCCAGCTTGGGCCGAACATGGGGGCGGTTGCCGAATCGTTCGTGATCCAGCAATCCGACAG
CATGATGGCCGCGGTCGTCAAACTGTCCGCACCGGTGATGCTGGTGCTTGTGCTGGTGGATCTAGCGATCGGCCTGGTGG
CGCGTGCGGCCGACAAGCTCGAACCGTCGAATTTGAGTCAGCCAATCCGTGGGGTGCTGGCGTTATTGCTGCTCGCCTTG
CTGACCAGCGTCTTCATCGCGCAATTCGGCGAAGCGCTTGGTTTCCTGCATTTCCAGCAGCAATTGCACGATGCCGCCAA
CGTGGGTGGCAAGAGAGCCGCGTCGCACTGA

Protein sequence :
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFIAYGQPADALAKIQTVGLVGV
VFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQMTNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFES
FRWWPLTQLGPNMGAVAESFVIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
LTSVFIAQFGEALGFLHFQQQLHDAANVGGKRAASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 7e-105 100
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 5e-105 100
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 1e-101 98
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 2e-102 98
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 8e-102 98
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 8e-102 98
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 1e-102 98
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 5e-94 87
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 5e-94 87