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Name : XAC29_02080 (XAC29_02080) Accession : YP_007634909.1 Strain : Xanthomonas axonopodis Xac29-1 Genome accession: NC_020800 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : - COG ID : - EC number : - Position : 478694 - 479767 bp Length : 1074 bp Strand : - Note : COG1377 Flagellar biosynthesis pathway, component FlhB DNA sequence : ATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGATGCGCGCAGGGACGGGGAAGTTCCGGTCAGCCC GGACGTCACTGCAGCCGCGGTGCTCTTTGGCGCGCTAATGGTCATGAAATCGGCCGGCGACTACTTCTCCGACCACATGC GCGCATTGATGACGATCGGCTTCGATTTCCCGGAAAATACACGCGATGCAACGGCAATAAACCGCGCACTGGGCCATATC GGCATCCAGGGATTGGTGTTGATGCTCCCCTTGCTGGTTGCTTGCCTGGTGGCTGGCGTGGCAGGCGGTGCTTTCCAGAC TGGGCTGAATGCCTCCCTCAAGCCGGTGGCGCCCAAGTTCGATTCCCTCAATCCCGCAACCGGGGTCAAGAAACTCTTTT CGTTGCGAAGCCTCATCAATCTACTGAAGTTGATCATCAAGGCCATCTTGATTGGCGTGGTGCTGTGGGCCGGTATCCGC ATCCTCATGCCGATGATCATTGGCCTTGCCTACCAGACACCACCCGACATTGCCCAGATTGCCTGGCGGACGCTGGGGAT GCTATTCGCATTGGGCGTGCTGCTGTTCGTACTGGTCGGCGCCGCAGACTGGAGCGTGCAGCACTGGCTGTTCATCCGCG ACAAACGAATGAGCAAGGACGAGCAGAAGCGCGAAGTCAAGGAGAGCGAGGGCGACCCGGAAATCAAGGGCAAGCGCAAG GAATTCGCCAATCAGATGGTGTTTGGCGACCCGCGCGAACGCGTCGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCGGTGGCACTGGCCTACGAGCCCGATGACTTCGGCCTACCGCAGGTCGTGGCCAAGGGCGTGGACGACGGCGCGC TGGAGCTGCGCGCCTTCGCGCATAACCAGGGCATTCCGATCGTTGCCAATCCGCCACTGGCACGTGCGCTGTATCAGGTT GAATTGGGCGACGCAGTGCCCGAACCACTGTTCGAAACGGTTGCAGTGGTGTTGCGCTGGGTCGATGAACTCGGTCGCGA CCACAGCGACGGCGATGGAGCTCTGCCATGCTAG Protein sequence : MSEEKTEKPTEKKLRDARRDGEVPVSPDVTAAAVLFGALMVMKSAGDYFSDHMRALMTIGFDFPENTRDATAINRALGHI GIQGLVLMLPLLVACLVAGVAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWAGIR ILMPMIIGLAYQTPPDIAQIAWRTLGMLFALGVLLFVLVGAADWSVQHWLFIRDKRMSKDEQKREVKESEGDPEIKGKRK EFANQMVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQV ELGDAVPEPLFETVAVVLRWVDELGRDHSDGDGALPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-126 | 100 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-126 | 99 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-120 | 94 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-116 | 91 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-117 | 91 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-105 | 82 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-105 | 82 |
