Gene Information

Name : XAC29_20835 (XAC29_20835)
Accession : YP_007638511.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Virulence
Product : chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4844397 - 4847177 bp
Length : 2781 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGCCGAGATCTCCCGCAGCTCCCTGTTCGGCAAGCTCAATCCGCTGGCCTACCGCGGCATCGAAAGCGCCACCGTGTT
CTGCAAGCTGCGCGGCAACCCGTATGTGGAATTGGTGCATTGGCTGCATCAGTTGCTGCAGCTGCAGGACTCGGACCTGC
ACCGCATCATCAGGCACTTTCAGCTCAACCCGTCCACGCTTGCGCGCGATGTCACCGCCGCGCTGGATGGCTTGCCGCGC
GGCTCCACTGCCGTGACCGATCTATCGGCCAATGTCGAAGAAGCGGTGGAGCGCGGTTGGGTGTACGCCTCACTCGGTTT
TGGTGAAGCGCAAGTACGCACCGGCTATCTGGTGGTCGGTATGTTGAGCGTGCGTGGCTTGCGTCATGCGTTGCTGGCGA
TCTCCAAGGAGTTCGACAAGCTCAAGCCCGCAGTGCTCAACGAGCGCTTCGCCGAGATCGTGGCCGGCTCGCCGGAAGAT
GGCTTGCTGCCCAGCGATGGATTTTCGCTTGGTCAGGCCGCTGCACCCGGGGAGACCAGCGGTGCCATCGCGCCTGCCGC
ACTCGGCAAGCAGGAAGCGCTGAAGAAATTCACCACCGACCTCACCGCCCAGGCGCGCGAAGGCAAGCTGGACCCGATCA
TCGGCCGCGACGACGAGATCCGCCAGGTGGTCGACATCCTGATGCGCCGCCGCCAGAACAACCCGATCCTGGTCGGCGAA
GCCGGCGTCGGCAAGACCGCGGTGGTGGAAGGGTTCGCGCAGCGCATCGCGCGCGGCGACGTGCCGCCGGCGTTGAAGGA
TGTGCAACTGCGCGCGCTGGATGTCGGCTTGCTGCAGGCCGGCGCCAGCATGAAGGGCGAGTTCGAACAGCGTCTGCGCG
CGGTGATCGACGAGGTGCAGGCCAGCCCCAAGCCGATCATTTTGTTCGTCGACGAAACCCACACCCTCATCGGCGCCGGT
GGTGCCGCAGGCACCGGCGATGCGGCGAACCTGCTCAAGCCGGCACTGGCGCGCGGCACGCTGCGCACGGTGGGCGCGAC
CACGTTTGCCGAATACAAGAAATACATCGAAAAGGACCCCGCGCTGACGCGGCGCTTCCAGGCCGTGCAGGTGGACGAAC
CGGACGAGTCCAAGGCCGTGCGCATGATGCGCGGCGTCGCTTCGATGATGGAACAGCATCACCGCGTGCAGATCCTCGAC
GAAGCGCTGGAAGCGGCGGTCAAGCTCAGCCACCGCTACATCCCTGCGCGGCAGCTGCCGGACAAGTCGGTGAGCCTGCT
GGACACGGCCTGCGCGCGCGTGGCGGTGAGCCTGCATGCCACGCCTGCGGAAGTGGACGACAGCCGCCGACGCATCGAAT
CGCTGGACACCGAGCAGGCGATCATCGAGCGCGAGCGTGCGATCGGCATCGTGGTGGAGGAGCGTGCCGCTGCGTGTGCT
GGCCTGCTGGAAAGCGAGCACGGCCGCCTGCAGGCGTTGGAACAGCGTTGGGTTGCAGAAAAGGCATTGGTCGACGAGCT
GTTGTCGCTGCGCGCGCAATTGCGCAGTGACAATGCGCCCGTAGAAGGCACTGGCAGCGCACTGGAAGCAGAGGCCGATA
CCGCGCAGGCAGCGTCTGGCGACATCGCCGTGCTCGACGCACCGGTGCAGGTTGATCGCGACACGCTGCTGGCGCGCCTG
CAATTGGTGCAGGCGGGACTAGGCGCGCTCCAAGGCGAATCGCCTCTGATCCTGCCCACTGTCGATCATCAGGCCGTTGC
TGCCGTCGTCGCCGACTGGACCGGCATCCCGGTCGGGCGCATGGCGCGCGACGAGATCGACACCGTGCTGCGCCTGCCCG
AACTGCTGGCCAAGCGCGTGATCGGCCAGGATCACGCCATGGAGATGATCGCCAAGCGCATCCAGACCAGCCGCGCCGGC
CTGGACAACCCGGACAAACCGATCGGCGTGTTCCTGCTGGCCGGCACCTCCGGCGTGGGCAAGACCGAAACCGCGCTCGC
CTTGGCCGAAACGCTGTACGGCGGCGAACAGAACCTGATCACCATCAACATGAGCGAGTACCAGGAGGCGCACACCGTCT
CCTCGCTCAAGGGCGCACCACCGGGCTACGTGGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCGGTGCGACGCAAGCCG
TACTCAGTGGTGCTGCTGGATGAAGTGGAGAAGGCCCACCCGGACGTCCACGAACTGTTCTTCCAGGTCTTCGACAAGGG
CTGGATGGAAGACGGCGAAGGCCGCCGCATCGACTTCCGCAACACCCTCATCATCCTCACCAGCAACGCCGGCACCGACC
TGATCGCCAGCCTGTGCAAGGACCCGGACCTGATGCCCGACCCGGAAGGCATGGCCAAGGCCATCCGCGAGCCGTTGTTG
AAGGTGTTTCCGCCGGCATTGCTCGGACGGCTGGTCGCGATTCCGTATTACCCGCTCAGTAACGCCATGCTCGGACAGAT
CGTGCGACTGCAGTTGAACCGCATCAAGACGCGCATCGAAGAGCGCTACAAGATTCCATTCGACTACGACGACTCGGTGG
TGGAGCTAGTGATCTCGCGATGCACCGAGAGTGAATCGGGCGGACGGATGATCGATGCGATTTTGACTAACTCGGTGTTG
CCGGAGATCAGTCGGGAGTTTCTGGAACGCGTGAATAGTGGTGATCCGGTTTTGCGGATCGAACTGGGTGCTTGCGACAG
AAGCTTCGTTTACGACTTCCTAAAAAATAGGCATCAGGAGACTAAGAATGGCAACCTATGA

Protein sequence :
MAEISRSSLFGKLNPLAYRGIESATVFCKLRGNPYVELVHWLHQLLQLQDSDLHRIIRHFQLNPSTLARDVTAALDGLPR
GSTAVTDLSANVEEAVERGWVYASLGFGEAQVRTGYLVVGMLSVRGLRHALLAISKEFDKLKPAVLNERFAEIVAGSPED
GLLPSDGFSLGQAAAPGETSGAIAPAALGKQEALKKFTTDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGE
AGVGKTAVVEGFAQRIARGDVPPALKDVQLRALDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVDETHTLIGAG
GAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVDEPDESKAVRMMRGVASMMEQHHRVQILD
EALEAAVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRRRIESLDTEQAIIERERAIGIVVEERAAACA
GLLESEHGRLQALEQRWVAEKALVDELLSLRAQLRSDNAPVEGTGSALEAEADTAQAASGDIAVLDAPVQVDRDTLLARL
QLVQAGLGALQGESPLILPTVDHQAVAAVVADWTGIPVGRMARDEIDTVLRLPELLAKRVIGQDHAMEMIAKRIQTSRAG
LDNPDKPIGVFLLAGTSGVGKTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKP
YSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCKDPDLMPDPEGMAKAIREPLL
KVFPPALLGRLVAIPYYPLSNAMLGQIVRLQLNRIKTRIEERYKIPFDYDDSVVELVISRCTESESGGRMIDAILTNSVL
PEISREFLERVNSGDPVLRIELGACDRSFVYDFLKNRHQETKNGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 52
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-127 46
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-127 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_20835 YP_007638511.1 chaperone ClpB VFG2076 Protein 0.0 74
XAC29_20835 YP_007638511.1 chaperone ClpB VFG2084 Protein 4e-136 44