Gene Information

Name : XAC29_18530 (XAC29_18530)
Accession : YP_007638068.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4325353 - 4326072 bp
Length : 720 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGCTCAAGATGCAAGCAGTCTCCAAGGTCTTCCGCACCGAACAGGTGGAAACGCATGCGCTGCGGTCGCTGGACCTGCA
TGTGCGCGAAGGCGAATTCGTCGCGGTCACCGGCCCCTCCGGCTCGGGCAAGACCACCTTCCTCAACCTGGCCGGGCTGC
TGGAAACCTTCACCAGCGGGCAGTATGTGCTCGACGGCGAAGACGTCAGCCATCTGTCCGACGATGCGCGTTCGCGCCTG
CGCAACCGGAAGATCGGTTTCATCTTCCAGGGCTTCAACCTGATTCCCGACCTCAACCTGTTCGACAACGTCGATGTGCC
GCTGCGGTATCGCGGCATGCCAGCAGCCGAGCGCAAGCAGCGCATCGAAGAGGCACTGACCAAGGTCGGCCTGGGTTCGC
GCCTGCGTCACTACCCCACCGAACTTTCCGGTGGCCAGCAGCAGCGTGCTGCGATTGCGCGCGCGCTGGCCGGTAGTCCA
CGTCTGCTGCTGGCCGACGAACCCACCGGCAACCTCGACTCGCAGATGGCGCGCGGGGTGATGGAACTGCTGGAAGAGAT
CAACAGCCAGGGCACCACCATCGTCATGGTCACCCACGACCCGGAACTGGCCGCACGCGCGCAGCGCAACGTGCATATCG
TCGACGGCCAGGCCACCGACCTGGAACGCAATCCCAGCCTGATGCGCGCGCCTGCCGCCGTTGCAACCCTGGCCGACTAA

Protein sequence : 
MLKMQAVSKVFRTEQVETHALRSLDLHVREGEFVAVTGPSGSGKTTFLNLAGLLETFTSGQYVLDGEDVSHLSDDARSRL
RNRKIGFIFQGFNLIPDLNLFDNVDVPLRYRGMPAAERKQRIEEALTKVGLGSRLRHYPTELSGGQQQRAAIARALAGSP
RLLLADEPTGNLDSQMARGVMELLEEINSQGTTIVMVTHDPELAARAQRNVHIVDGQATDLERNPSLMRAPAAVATLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_18530 YP_007638068.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-39 49
XAC29_18530 YP_007638068.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-43 48
XAC29_18530 YP_007638068.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-32 46