Gene Information

Name : XAC29_18340 (XAC29_18340)
Accession : YP_007638032.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4281967 - 4283163 bp
Length : 1197 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGTCCAATCGCACCACTCATAGCCATGACGGCGAGCGCGCGCTGTCGCTCGCAACGCTGGCGATCCATGGAGGGCAGTC
GCCAGATCCGAGCACCGGCGCGGTGATGCCGCCGATCTACGCGACGTCCACCTATGCGCAGTCCAGCCCCGGCGAGCATC
AGGGTTTCGAGTATTCGCGTACCCATAACCCCACGCGCTTCGCCTACGAGCGTTGCGTCGCCGCGCTGGAAGGAGGCACG
CGCGCATATGCGTTCGCCTCCGGCATGGCCGCCACCTCGACGGTGATGGAGTTGCTGGATGCCGGCAGCCACGTGGTGGC
GATGGACGACCTGTACGGCGGCACCTTTCGCTTGTTCGAGCGCGTGCGTCGCCGCACTGCCGGCCTGGATTTCAGCTTCG
TCGACCTGACCGACCCGGCTGCGTTCGAGGCGGCGATTCGCCCCGATACCAAGATGGTGTGGATCGAGACCCCGACCAAC
CCGATGCTCAAGCTGGTCGATATCGCTGCCATTGCCGAGATCGCGCGCAAGCGCGGCCTGCTGATCGTGGTCGACAACAC
CTTTGCTTCCCCGATGCTGCAGCGCCCGCTCAGCCTGGGTGCGGACATCGTCGTGCACTCGGCCACCAAGTATCTCAACG
GCCACTCGGACATGGTGGGCGGTATCGCGGTCGTTGGCGACAACGCCGAGCTCGCCGAGCAGATGGCGTTCCTGCAGAAC
TCCATCGGCGGCGTCCAGGGCCCGTTCGACAGCTTCCTCGCCTTGCGCGGCCTCAAGACCCTCCCGCTGCGCATGCGGGC
GCACTGCGAAAACGCACTGGCGCTTGCGCAATGGCTGGAAACCCACCCTGCGATCGAAAAGGTCATTTACCCCGGCCTTG
CCTCGCACCCGCAACATGCGCTCGCGAAGAGCCAGATGTCCGGCTTCGGCGGCATCGTCTCCATCGTCCTCAAGGGCGGC
TTCGACGCAGCCAAGCGTTTCTGCGAAAAGACCGAATTGTTCACCCTGGCCGAATCGCTCGGTGGTGTGGAAAGCCTGGT
GAATCATCCCGCCGTCATGACGCACGCCTCCATTCCGGTGGCCCGCCGCGACCAGCTCGGTATCAGCGATGCGCTGGTGC
GGTTGAGTGTGGGGATCGAGGATGTGGAGGATTTGCGTGGGGATTTGCAGGCTGCTTTGGCGGGAGATGAAGGGTAA

Protein sequence :
MSNRTTHSHDGERALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGT
RAYAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFEAAIRPDTKMVWIETPTN
PMLKLVDIAAIAEIARKRGLLIVVDNTFASPMLQRPLSLGADIVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHALAKSQMSGFGGIVSIVLKGG
FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARRDQLGISDALVRLSVGIEDVEDLRGDLQAALAGDEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-84 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-83 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-59 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_18340 YP_007638032.1 cystathionine gamma-synthase BAC0207 Protein 3e-69 46