Gene Information

Name : XAC29_13465 (XAC29_13465)
Accession : YP_007637088.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Unknown
Product : phage-related capsid packaging protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3119181 - 3120203 bp
Length : 1023 bp
Strand : -
Note : COG5518 Bacteriophage capsid portal protein

DNA sequence :
ATGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCCGCCGTGCCTACACGCGCCGAGGCGTTTACCTTTGGCGA
CCCGACACCGGTGCTCGATGGGCGCGGTGTGCTGGACTATCTGGAGTGCTGGCAGAACGGGCGCTGGTACGAGCCGCCGG
TGGCACTGGATGGCCTGTCCAAGACCACGCGTAGCAATCCGTTCCTGCAGTCCGGGCTGATCTTCAAGCGCAACATGCTG
GCGCGCACCTTCAAGCCGCATCGGCTGCTGCCCCGCGAGGCCTTCGAGCAGCTGTCACTGGATTGGATCACGCTGGGCAA
TGGCTACCTTGAGCGCCGCCGCAACCGAATGGGCGGTGCGCTGTCGCTGAGTGCGCCGCTGTCCAAGTACATGCGGCGCG
GTATCGCCGAGGGCGAGTACTTCCAGGTGCGCACCTGGCACGACGAGCACGTGTTCGAGCCGGGTAGCGTGTTCCAGCTG
CGCGAAGCCGATGTCGATCAGGAACTCTATGGCCTGCCGGAGTGGATGCCGGCGATGCAATCCGCGCTACTCAACGAGTC
GGCCACGCTGTTCCGCCGCAAGTACTACAACAACGGCTCGCATGCCGGTTTCATCCTGTACCTGACGGACCCGCAGCAAA
GCCAGGAAGACGTCGATGCGCTGCGCAACGCCATGAAGGGCGCCAAGGGGCCGGGCAACTTCCGCAACCTGTTCCTGTAC
TCGCCAGGCGGCAACAAGGACGGGCTGAAGCTGATCCCGGTCAGCGAAGTGGCGGCCAAGGACGAGTTCAGTGGCATCAA
GGGCATCACCCGCGACGACATGCTGGCCGCGCTGCGCATCCCGCCGCAACTCATGGGCATCGTGCCGCAGAACGCTGGCG
GTTTCGGGTCCATCCGTGAGGCCGCTGCCGTCTGGGCTGCCAACGAGCTGGAACCGCTGCAGGCGCGCATGTTGAAGATC
AACGACTGGGTGGGCGATGAGGTGATCGCCTTCACCCCCTACGCGCCACCAGCGGCCGCGTAA

Protein sequence :
MLTDQLPATAPAAPAVPTRAEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML
ARTFKPHRLLPREAFEQLSLDWITLGNGYLERRRNRMGGALSLSAPLSKYMRRGIAEGEYFQVRTWHDEHVFEPGSVFQL
READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRNAMKGAKGPGNFRNLFLY
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI
NDWVGDEVIAFTPYAPPAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-113 70
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 7e-92 57
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 7e-92 57