|
Name : XAC29_13315 (XAC29_13315) Accession : YP_007637060.1 Strain : Xanthomonas axonopodis Xac29-1 Genome accession: NC_020800 Putative virulence/resistance : Virulence Product : type IV secretion system energizing component VirB4 Function : - COG functional category : - COG ID : - EC number : - Position : 3095079 - 3097472 bp Length : 2394 bp Strand : - Note : COG3451 Type IV secretory pathway, VirB4 components DNA sequence : ATGTTCAGCCCAGACAGTCCGATCAGCGAGTTTGTTTCCATCTCGACGCATGTTGCGCCGTCCGTCGTCAAGACGACCGC CGGCGACTACCTGTTGATCTGGCATCTGGGCGGCTTGCCGTTCGTGGGGCGAGACGAATTCGAGCTCGAACAGCGGCACA ACACGTTCAACCGTCTTCTGCAGACTCTGCGCGCCCCGGATTTCGCCAACGTTGCATTCTGGGTCCACGATGTACGGCGT CGGCGCAGAATCGGTGCAGGCGGACGTTTCAAGCAGGCATTCAATCAAACTCTGTCTGACGAATATTACACAGCGCTTTC ATCGCAAAAGATCATGCAGAACGAGCTGTATTTCAGCATGATTTACAGGCCGGTAGTCACGGGACGTCGCTTGGTGGAGA AATCCGCGAACCCGGACAAGATTCGCGCCGAGGAAGAACAGGCTGTCGCGAAAGTTGTCGAACTGGCTACTAATGTCGAA GCCGTGCTCAAGGATTATGCGCCGTACCGTCTCGGTATGTACGAGGCAAAGAACGGCCTGGTTTTCTCCGAGACCTTGGA GTTTCTGGGCTACTTGTTGAACCGAATCGATGAGCCTGTGCCGGTCTTGCCAGCTCCGGTGCCCGCGTATTTGCCCGTCA GTAAGCACATGTTCGCCAACAAGACCGGCGATTTCGTCATTCGTACTCCAGACGGAATCAATCACTTTGGCGCCATCTTG AATATCAAGGAATATGCGGATGGAACCTATCCGGGCATTCTGAATGGCCTGAAGTACCTGGATTCTGAATACGTCATGAC CCACTCGTTCAGCCCGGTCGGCCGACACGATGCGCTGAAGGTGTTGGAACGCACCAAGGGGATGATGGTTTCTTCAGGCG ACAAATCGTCGACCCAGATCCGCGATCTCGATGTCGCGATGGACGATGTTGCCTCGGGAAACTTCGTGCTCGGCGAATAC CATTTCACATTGGCGGTCTATGCCGACAGCCAGGAGAAGCTGGCTAGGCAGATCGCAACCACCCGAGCCGAATTGTCCAA TGCCGGCTTCGTCTCGGCCAAGGAAGATCTTGCGATCGCCTCGTCGTTTTATTCGCAGCTGCCAGGTAACTGGCGCTTCC GTACGCGCATCGCCAACCTGAGCTCGCTGAACTTCCTTGGCTTGTCGCCGCTGCACAATTTTGCCCAGGGCAAGCAGCAC AACAATCCATGGGGTGACTGCGTCACCACCCTGCAGACAACCAATGGGCAGCCGTACTACTTCAACTTCCATGCGACGCA TCCGTCCGAGAACTCATTGGGAGAGAAGGCCATCGGCAATACGATGGTGATCGGCAAGTCGGGTACCGGTAAGACGGCGC TGATCAACTTCCTGTTGAGTCAGGTGCAGAAGTTCGACCCGATTCCGACCATCTTCTTCTTCGACAAGGACCGCGGCGCG GAGATCTTCGTGCGCGCGTGCGGTGGCAACTACCTGGCGCTGGAAAATGGGTCTCCGACTGGCTTCAACCCTTTCCAATG CGAGCGCAATGAAGCCAACACCCAATTCCTGGCCGAGTTGATCAAGGTGCTGGGCGGCAAGGCCGAATACAGCGCCCGTG AGGAAGAGGACATCTATCGCGCGGTGGAAGGCATGCTGGACACGCCGATGCACCTGCGCAGCATGAGCAATTTCCGCAAG AGTCTGCCCAACATGGGCGACGACGGTCTGTATGCGCGTCTGCGCCGCTGGACCGCTGGCAATTCGCTCGGTTGGGTGTT CGACAATCCGGTGGACACGATCGACCTGACGCGGGCGTCGATCATCGGGTTCGACTACACCGACGTGATCGACAACGCTG AAGTGCGCGTGCCGGTGATCAACTACCTGCTGCATCGCCTGGAAGCGCTGATCGACGGCCGCCCGCTGATCTACGTGATG GACGAATTCTGGAAGATCCTGGACGGCAAGGGTGGCCTGAAGGAATTTGCCAAGAACAAACAGAAGACCATCCGTAAGCA GAATGGCTTAGGGATTTTCGCCACACAGAGCCCCGAAGACGCGCTGGCCAGTGACATTGCCGCTGCATTGATCGAGCAGA CGGCCACCATGATCCTGCTGCCGAACCCGAATGCCAGCCGCGACGATTACATGGAAGGGCTCAAGCTCACCGACGCCGAA TACCAGGTTGTGGTGTCGTTGGATGAGCGCTCGCGCTGTTTCCTGGTCAAGCAGGGCCACGCGTCGGCGGTGTGCCAGCT CAACCTGCGCGGGAAGGGCTCAAGCTCACCGACGCCGAATACCAGGTTGTGGTGTCGTTGGATGAGCGCTCGCGCTGTTT CCTGGTCAAGCAGGGCCACGCGTCGGCGGTGTGCCAGCTCAACCTGCGCGGGATGGATGACGCGCTGTCGGTGA Protein sequence : MFSPDSPISEFVSISTHVAPSVVKTTAGDYLLIWHLGGLPFVGRDEFELEQRHNTFNRLLQTLRAPDFANVAFWVHDVRR RRRIGAGGRFKQAFNQTLSDEYYTALSSQKIMQNELYFSMIYRPVVTGRRLVEKSANPDKIRAEEEQAVAKVVELATNVE AVLKDYAPYRLGMYEAKNGLVFSETLEFLGYLLNRIDEPVPVLPAPVPAYLPVSKHMFANKTGDFVIRTPDGINHFGAIL NIKEYADGTYPGILNGLKYLDSEYVMTHSFSPVGRHDALKVLERTKGMMVSSGDKSSTQIRDLDVAMDDVASGNFVLGEY HFTLAVYADSQEKLARQIATTRAELSNAGFVSAKEDLAIASSFYSQLPGNWRFRTRIANLSSLNFLGLSPLHNFAQGKQH NNPWGDCVTTLQTTNGQPYYFNFHATHPSENSLGEKAIGNTMVIGKSGTGKTALINFLLSQVQKFDPIPTIFFFDKDRGA EIFVRACGGNYLALENGSPTGFNPFQCERNEANTQFLAELIKVLGGKAEYSAREEEDIYRAVEGMLDTPMHLRSMSNFRK SLPNMGDDGLYARLRRWTAGNSLGWVFDNPVDTIDLTRASIIGFDYTDVIDNAEVRVPVINYLLHRLEALIDGRPLIYVM DEFWKILDGKGGLKEFAKNKQKTIRKQNGLGIFATQSPEDALASDIAAALIEQTATMILLPNPNASRDDYMEGLKLTDAE YQVVVSLDERSRCFLVKQGHASAVCQLNLRGKGSSSPTPNTRLWCRWMSARAVSWSSRATRRRCASSTCAGWMTRCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trwK | YP_001610476.1 | TrwK protein | Virulence | Not named | Protein | 8e-114 | 41 |
| trwK | CAD42844.1 | TrwK protein | Not tested | trw-PAI | Protein | 6e-114 | 41 |
