Gene Information

Name : XAC29_11435 (XAC29_11435)
Accession : YP_007636705.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2656807 - 2658978 bp
Length : 2172 bp
Strand : +
Note : -

DNA sequence :
ATGGCACAGGCACACGCGATGGAGGTGCTGCTGCGCCCCGCGGTGGAGCTGTACACCGTGGCGGTCTGTACGGCGGCCGC
GCTCGCCTGCGTGGCGGCACCGTGGGCGCTGGCGCTGAATCCGCAGCTGGGGCTCGCGAGCGCACTCGCCTTCGCGGTCT
TCGGCGGGGTCAGGCTCCGACAGGCGTACGCGATCCTGCGCTACCGCCGCAACATCCGCCGCCTGCCGCGCTACGTGATG
ACCAGCCGCGATGTTCCCGTCAGCCAGCAACGGCTGTTCCTGGGCAGGGGCTTCCGCTGGGACCAGCGCCACACGCATCG
GCTCATGCAGACCTACCGGCCGGAGTTCCGCCGCTACGTGGAGCCGACACCGCTGTACCGGTTCGCGCGGCGCTACGAGG
AGCGCCTGGAGTTCGCCCCGCCGCCATTCTCGGGGCTAGCGCGCTGGACGGCGTGGGACCATCCGCTGAACCCGGTGCGC
CCCTTGCCACCCGTGGGCGGCCTGCCCCATCTGCACGGCATCGAGCCCGAAGAGATGGACGTCACCCTGCCGCTGGGCGA
ACGGGTCGGCCACACGCTGGTGCTCGGCACCACGCGGGTCGGCAAGACCCGGCTGGCCGAACTGTTCATCACGCAGGACA
TCCGCCGCCGCGCGGCGGATGGCGGGCACGAGGTGGTGATCGTGTTCGATCCGAAGGGGGATGCGGACCTGCTCAAGCGG
ATGTACGTGGAAGCACGCCGCGCGGGACGCGAGAGCGAGTTCTACGTGTTCCATCTGGGCTGGCCGGACCTGAGCGCGCA
CTACAACGCCATCGGCCGCTTCGGCCGCATCTCCGAAGTCGCCACCCGCATCGCGGGGCAACTGTCCGGGGAAGGCAACA
GCGCCGCTTTCCGTGAGTTCGCGTGGCGGTTCGTCAACATCATCGCCCGCGCGCTCGTGGAACTGGGGCAGCGACCGGAC
TACCTGCTGATCCAGCGGCACGTCATCAACATCGATGCGCTGTTCATGGAGTATGCGGCGCAGTTCTTCGCGAAGACCGA
ACCCAAGGCCTGGGAGGTCATCGTCCAGCTCGAAGGCCGGCTCAACGACAAGAACATCCCGCGCAACATGATCGGCCGCG
AGAAGCGCGTGATCGCGATCGAGCAGTACCTCTCGCAGGTCCGCGTCTACGACCCGGTGCTCGACGGCCTGCGAAGCGCC
GTGCGCTACGACCGGACGTACTTCGACAAGATCGTCGCGAGCCTGCTGCCGCTGCTGGAGAAGCTCACCACGGGCAAGGT
CGCCCAGTTGCTGGCGCCGAATTACTCGGACCTCGCCGATCCGCGGCCGATCTTCGACTGGATGCAGATCATCCGCAAAC
GCGCGATCGTGTACGTGGGACTGGACGCGCTCTCAGATGCGGAGGTGGCGGCCGCCGTGGGCAACTCGATGTTCTCGGAC
CTGGTCTCGGTCGCGGGGCACATCTACAAGTTCGGCGTGGACGACGGCCTGCCGGGTGCGAATGCGAATTCCAAGGTGCC
CATCAACGTCCATGCCGACGAGTTCAACGAGCTCATGGGCGATGAATTCATTCCCATGGTCAACAAGGGCGGCGGTGCCG
GCGTCCAGGTCACGGCGTACACCCAGACGCTCTCCGATATCGAGGCGCGCATCGGCAATCGCGCGAAGGCGGGACAGGTC
GTGGGGAATTTCAACAACCTGGTCATGCTGCGGGTGCGAGAGACGGCCACGGCCGAGCTGCTGACGCGCCAGTTGCCCAA
GGTCGAGGTGTTCGCGACCTCGGTGATGAGCGGCGCCACGGACAGCTCCGATCCCACGGGCAACACCGCGTTTACCTCGA
ACACCCAGGACCGCATCGCCAGTACCAGCGTGCTGATGATCGAGCCCGCGCACGTAGTGGCGTTGCCGAAGGGCCAGGCC
TTCGCGCTGATGGAAGGTGGCAACCTCTGGAAGGTGCGCATGCCGCTGCCCGCGCCCGATCCCGACGAGGCCATGCCGCG
CGATCTGCAGGAGCTCGCTGCCGGCATGCGGTTGCACTACGTCGAGGCGGGCGCATGGTGGGATGGACAGATCGCGCCAG
GGCTGCAGGACGCAACCTTGCCCGACGATCTACTGGCAGGTTTCGCGCCGCCGGAGGACGCAGGCGGAAACCCTGGAGCT
GCGGCGCCATGA

Protein sequence :
MAQAHAMEVLLRPAVELYTVAVCTAAALACVAAPWALALNPQLGLASALAFAVFGGVRLRQAYAILRYRRNIRRLPRYVM
TSRDVPVSQQRLFLGRGFRWDQRHTHRLMQTYRPEFRRYVEPTPLYRFARRYEERLEFAPPPFSGLARWTAWDHPLNPVR
PLPPVGGLPHLHGIEPEEMDVTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGHEVVIVFDPKGDADLLKR
MYVEARRAGRESEFYVFHLGWPDLSAHYNAIGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD
YLLIQRHVINIDALFMEYAAQFFAKTEPKAWEVIVQLEGRLNDKNIPRNMIGREKRVIAIEQYLSQVRVYDPVLDGLRSA
VRYDRTYFDKIVASLLPLLEKLTTGKVAQLLAPNYSDLADPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSD
LVSVAGHIYKFGVDDGLPGANANSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKAGQV
VGNFNNLVMLRVRETATAELLTRQLPKVEVFATSVMSGATDSSDPTGNTAFTSNTQDRIASTSVLMIEPAHVVALPKGQA
FALMEGGNLWKVRMPLPAPDPDEAMPRDLQELAAGMRLHYVEAGAWWDGQIAPGLQDATLPDDLLAGFAPPEDAGGNPGA
AAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 84
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 81
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 73
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 0.0 69
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 0.0 69
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 69
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 0.0 62
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 0.0 62
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 0.0 62
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 0.0 62
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 0.0 62
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 0.0 60
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 3e-179 58
traD AAW83057.1 TraD Not tested GGI Protein 1e-126 51