Gene Information

Name : XAC29_11355 (XAC29_11355)
Accession : YP_007636689.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Unknown
Product : plasmid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2640803 - 2643076 bp
Length : 2274 bp
Strand : +
Note : COG0553 Superfamily II DNA/RNA helicases, SNF2 family

DNA sequence :
ATGTCCTTCGAAATCGATACCGCCGCGGACAACGCACCCGTGCAGGGCGACCTGCTCGGCGCGGAGCCTTCTCCCCTGGA
GCTGAGCCTCACTGAGTTCGTCGCCGAGTTCGGCGACGAACTGCTGGAGTCCCTCAACCGCGCCAACCCACCGGTCTACA
GCGGCCAACCCAGAGCCCATCGCCAGCGCATCGTCGCCGGCCTCAAGCGCAGGCTGTTTCCCGCGCAGGCCGAGGTGGTC
CATGCCGCCGCCGAACTGCTGATCGACCGCGGCGAGCGTGCCGCGATCGTCAACGGCGAAATGGGCTGCGGCAAGACGAC
CGTGGGCATCGCCACGGCCGCCGTGCTGCACGCCGAAGGCTACCGCCGCACGCTTGTGCTGTCGCCGCCGCACCTGGTCT
ACAAGTGGCGGCGCGAAATCCTCGAAACGGTTGCCGGTGCCAGGGTCTGGGTGCTCAACGGCCCGGATACCCTGGTCAAA
CTCATCAAGCTGCGCGAGCAGTTGGGCGAGCGGCCCACCGGCCAGGAGTTCTTCGTCCTCGGCCGGGTGAGGATGCGGAT
GGGCTTTCACTGGAAGCCCGTCTGCGCGGTGCGGCGCACCCGCCACGGCGACGTGGCGACGTGCCCCGACTGCGGCCATG
TCGTCACCGACCTCGACGGCGAGCCGGTCCATCCGGCCATGCTGGACGAGGACGAGCACCGCAGAAAGTGCGGCCACTGC
GCCGCGCCCTTGTGGACGCTCATGCGGCCCGAGAGCCTGTCCGGCAACGCCCAGTCCTCGGCCGTCGCCAAGGCGCTCCA
GCGCATTCCCACGATCGGCGAAGCCACCGCGCAGAAGCTGATGCGAAAGTTCGGCGACGGCTTTCTGGCCTCGATGCTGG
GCGACAACATCCACGAGTTCATCAACCTGATGGACGCCAATGGCGAACTGGTGTTCTCTGACCGGCAGGCCACGCGCATG
GAGCGCGCCATGGCGAACATGGAGTTCGGTTTCGGCGAGGGCGGCTACCAGCCCACGGAGTTCATCAAACGCTACCTGCC
GCAAGGCACGTTCGACCTGCTGATCCCGGACGAGGCGCACGAGTACAAGAACGGGGGCAGTGCCCAGGGCCAGGCGATGG
GTGTGCTGGCCGCGAAGTGCCGCAAGGCATTGCTGCTCACCGGCACGCTGATGGGTGGATACGGCGACGACCTGTTCTAT
CTGCTGTTCCGCGCCCTGCCCGGGCGGATGATCGAAGACGGCTACCGGCCGGCGAAGAATGGCTCGATGACCTCGGCGGC
GATGGCGTTCATGCGTGACCACGGGGTGCTGAAGGACATCTATTCCGAGAGCGCCGGCACGGCGCACAAGACCGCCAAGG
GCAGCAAGACCAGTGTCCGAACGGTCAAGGCACCGGGCTTCGGTCCCAAGGGTGTGCTGCGGTGCGTGCTGCCGTTCACG
ATCTTCCTCAAGCTCCGGGACCTCGGGCGTGACGTGCTGCCCCCGTACGACGAGGAGTTCCGCGAAGTTCCGATGGCGCC
CGCGCAGGCCAGCGCCTACAGCGCGCTCTCGATCGCGCTCACCAGCGCGTTGCGCCAGGCCCTGGCCCGTCGCGACACGA
CGCTCCTCGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGACACGTGCTTCCGCGCGGAAAACGTCGTGCATCCACGC
ACACGCGACACGCTGGCTTTCGTCCCCGCCCAGTTCCACGACGCGCAGGCGATGCCCAAGGAACGGGAGTTGATCGACAT
CTGCCGCCAGGAGAAGGCGCAGGGCCGCAAGACGCTCGTCTACACGGTGTACACCGGAACGCGCGACACGACCTCGCGTC
TCAAGCGGCTGCTCGAAGTCGAGGGCTTCAAGGTGGCCGTGCTCCGCGCCAGCGTGGACGCGAGCCGCCGCGAGGACTGG
ATCGCCGAGCAGCTGGACCGCGGCATCGACGTGCTCATCACCAATCCGGAGCTGGTCAAGACCGGACTGGATCTGCTGGA
GTTTCCGACCATCGTGTTCATGCAATCGGGCTACAACGTGTACTCGTTGCAACAGGCAGCACGGCGCTCATGGCGCATCG
GCCAGACGCAATGCATCAAGGTGATCTATCTCGGCTACGCCGCTTCTTCGCAAATGAGCTGCCTGAAGCTGATGGCCCAG
AAGATCATGGTGGCGCAGAGCACTTCGGGAGACATCCCGGAGAGCGGGCTCGATGTGCTGAACCAGGACGGGGATTCCGT
CGAAGTCGCGCTCGCGCGGCAACTGGTGAACTGA

Protein sequence :
MSFEIDTAADNAPVQGDLLGAEPSPLELSLTEFVAEFGDELLESLNRANPPVYSGQPRAHRQRIVAGLKRRLFPAQAEVV
HAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLHAEGYRRTLVLSPPHLVYKWRREILETVAGARVWVLNGPDTLVK
LIKLREQLGERPTGQEFFVLGRVRMRMGFHWKPVCAVRRTRHGDVATCPDCGHVVTDLDGEPVHPAMLDEDEHRRKCGHC
AAPLWTLMRPESLSGNAQSSAVAKALQRIPTIGEATAQKLMRKFGDGFLASMLGDNIHEFINLMDANGELVFSDRQATRM
ERAMANMEFGFGEGGYQPTEFIKRYLPQGTFDLLIPDEAHEYKNGGSAQGQAMGVLAAKCRKALLLTGTLMGGYGDDLFY
LLFRALPGRMIEDGYRPAKNGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGSKTSVRTVKAPGFGPKGVLRCVLPFT
IFLKLRDLGRDVLPPYDEEFREVPMAPAQASAYSALSIALTSALRQALARRDTTLLGVVLNVLLAWPDTCFRAENVVHPR
TRDTLAFVPAQFHDAQAMPKERELIDICRQEKAQGRKTLVYTVYTGTRDTTSRLKRLLEVEGFKVAVLRASVDASRREDW
IAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQTQCIKVIYLGYAASSQMSCLKLMAQ
KIMVAQSTSGDIPESGLDVLNQDGDSVEVALARQLVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 87
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 83
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 70
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 70
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 69
yea AAW83099.1 Yea Not tested GGI Protein 3e-180 50