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Name : XAC29_11200 (XAC29_11200) Accession : YP_007636658.1 Strain : Xanthomonas axonopodis Xac29-1 Genome accession: NC_020800 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 2611923 - 2613968 bp Length : 2046 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : ATGCGCGTGGTTCTGTGCGAGAAGCCGTCCCAGGGCAAGGACATCGCCCGGGTCCTGGGCGCACACCGGCGAGAAGCCGG CTGCCTGGGTGGGCCGGGCATCACAGTCACCTGGGGCAGCGGCCACCTGATCGAAGCCGCGCCCCCGGAGGCCTACGGCG AGCACTTCCAGCGCTGGACGCTGGAGACGCTGCCGATCGTTCCCCCGCGGTGGCAGTGGGTCGTCAAGGCACGCAGCGCC GCGCAGTTCAAGGTCGTCAAACGGCTGCTCGGCGAGGCCTCCGAGCTCATCATCGCCACCGACGCCGATCGCGAAGGCGA GATGATCGCCCGCGAGATGATCGACTACTGCGGCTACCGCGGCCCGGTCCAGCGTCTGTGGCTGTCGGCGCTCAACGATG CGTCGATCCGCAAGGCGTTCGGCGCACTGCGGGCCTCCAGCGAGACGCTCTCCCTCTACCACTGCGCGCTCGCGCGTTCC CGCGCCGACTGGCTGGTCGGCATCAATCTGACCCGCCTGTTCACGCTGCTCGGGCGCCATGCCGGCCACGACGGCGTGCT CTCCGTGGGGCGCGTGCAGACGCCCACCCTCAAACTGGTCGTGGACCGCGACCGGGAGATCGCGGCATTCGTGCCGGTTC CGTTCTGGTCCATCGATGTGTCTCTTTCCGCGGCAAATGTGCCGTTCTCCGCCCATTGGCTTGCGCCCCGCACCGCAACG GACGATGCGGGACGCTGTCTGCGGCAGTCCGTCGCACGCCATGCGGCCGACGCCATCCGCGCCGCCGGCACCGCGCAGGT CGTGCACACCGAGACCGAGCGCGTGCGCGAAGGCCCGCCCCTTCCCTTCGATCTGAGCACGTTGCAGGAAGTCTGTTCAC GGCGCCTCGGCCTGGAGGTGCAGGAAACCCTCGACATCGCGCAAGCCCTCTACGAGACGCACAAGGCGACGACGTATCCC CGCACCGATGCGGGTTACCTGCCCGAGAACATGCTCGCGGAGGTTCCCACGGTCATCCAAAGTCTGGTGAAGACCGACCC CGCGCTGCAGCCGCTGATCGACCGCCTCGACTTCCGCCAGCGTTCCCGGGCCTGGAACGATGCGAAGATCACCGCGCACC ACGCCATCATTCCCACGCTGGAACCTGCCGATATTTCTGCGATGTCCGCGAAGGAGCTTGCGGTGTACCGGCTCATCCGC GCCCACTATCTCGCGCAGTTCCTTCCCCATCACGAGTTCGACCGAACCGTCGTGCGCTTCCGATGCGGCGGCGAGACGCT GCAGGCGGTCGGCAAGCGCATCGCCGTTCCGGGCTGGCAGCACGCATTCTCGGCACCGTCGCTGCCGCACGTCGCGGCCG ATGGGGCTGACACCGAAGGCAGCGACGAAGCGCCCCGCGAGCAGATGCTGCCGGTACTGCAGGAAGGCATATCGTGTCAG GTGAGCGCGCTGGATCTGAAGTCGCTGAGCACCAAGCCGCCACGGCCCTATACCCAGGGCGAACTCGTCAAGGCGATGAA GACGGTCGCCCGGCTCGTGACCGATCCGCGCCTCAAGCAAAAGCTCAAGGACACCACCGGCATCGGCACGGAGGCAACGC GCGCGAACATCATCAGCGGGCTGCTTTCCCGGGGATTCCTGATCCGCAAGGGCCGCGCCGTACGGGCATCGGACACGGCG ATGATGCTTATCGACGCCGTTCCCGCGGCCATCGCGGACCCGGGCACCACGGCGATCTGGGAGCAGGCCCTGGACATGAT CGAAGCGCGCCAGATGGGACTGGAGTCCTTCGTCGAGAAGCAGGCCGCCTGGGTCACGCAGCTGGTGCGGCAGCATCTCG GCACCACCCTCGCGATACGCAGTCCCGAGGGCCCGCCTTGCCCGCTGTGCGGCGCGGCGACGCGCCAGCGCACTGGCAGG AGCGGGCCGTTCTGGTCCTGCAGCCGCTACCCGGACTGCAAGGGAACGGCCCCGGTCGCACCCGCGCAAGCGGGCCCGGA CGGGCAGAAGCGATCCAGGAGCCGCGGCGCTCGCGCGCAACGCTAG Protein sequence : MRVVLCEKPSQGKDIARVLGAHRREAGCLGGPGITVTWGSGHLIEAAPPEAYGEHFQRWTLETLPIVPPRWQWVVKARSA AQFKVVKRLLGEASELIIATDADREGEMIAREMIDYCGYRGPVQRLWLSALNDASIRKAFGALRASSETLSLYHCALARS RADWLVGINLTRLFTLLGRHAGHDGVLSVGRVQTPTLKLVVDRDREIAAFVPVPFWSIDVSLSAANVPFSAHWLAPRTAT DDAGRCLRQSVARHAADAIRAAGTAQVVHTETERVREGPPLPFDLSTLQEVCSRRLGLEVQETLDIAQALYETHKATTYP RTDAGYLPENMLAEVPTVIQSLVKTDPALQPLIDRLDFRQRSRAWNDAKITAHHAIIPTLEPADISAMSAKELAVYRLIR AHYLAQFLPHHEFDRTVVRFRCGGETLQAVGKRIAVPGWQHAFSAPSLPHVAADGADTEGSDEAPREQMLPVLQEGISCQ VSALDLKSLSTKPPRPYTQGELVKAMKTVARLVTDPRLKQKLKDTTGIGTEATRANIISGLLSRGFLIRKGRAVRASDTA MMLIDAVPAAIADPGTTAIWEQALDMIEARQMGLESFVEKQAAWVTQLVRQHLGTTLAIRSPEGPPCPLCGAATRQRTGR SGPFWSCSRYPDCKGTAPVAPAQAGPDGQKRSRSRGARAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 70 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 69 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-170 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-170 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-170 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-155 | 48 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-159 | 48 |
