Gene Information

Name : XAC29_10665 (XAC29_10665)
Accession : YP_007636555.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Virulence
Product : LuxR/UhpA family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2478447 - 2479094 bp
Length : 648 bp
Strand : +
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
ATGACCATCAGAGTTTTTCTGATCGACGATCATGCACTCGTGCGTACAGGCATGAAGATGATTCTGTCCAAGGAAGTGGA
TGTCGATGTGGTGGGTGAAGCAGAGAGCGGCGAAGCTGCATTGCCGCAGATTCGTCAACTCAAACCGGACATCGTGCTGT
GCGACCTGCATTTACCCGGCGTCAGCGGCCTGGAAATTACCGAGCGCATCGTCAAGGGCGACTACGGCACGCGGGTCATC
ATCGTCTCCGTGCTCGAAGACGGCCCATTGCCCAAGCGTTTGCTCGAGGCAGGCGCCTCCGGTTATGTGGGCAAGGGCGG
TGACGCGCACGAGTTGCTGCGCGCGGTGCGTGAAGTCGCATTGGGACGGCGTTACCTCGGCAACACGATCGCGCAGAACC
TGGCTCTGTCCAATCTGGAAGGTGGCGGTTCACCGTTCGATGCATTGTCGCCCCGCGAGCTGGAAGTGGCGTTGCTGCTG
ACCCAAGGGCTGCGCCAGGAAGACATCGCCAAGCGCCTGAACCTCAGCGCCAAGACCATCAACACGCACAAGGCACGCCT
GTTTGAGAAGGTCGGCATCCAGGACAACATCGCGCTGGCGCGGCTGGCCAATCAATACGGTCTGACCGATCCCTCCCGGG
TGCTGTGA

Protein sequence :
MTIRVFLIDDHALVRTGMKMILSKEVDVDVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVSGLEITERIVKGDYGTRVI
IVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLL
TQGLRQEDIAKRLNLSAKTINTHKARLFEKVGIQDNIALARLANQYGLTDPSRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-41 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_10665 YP_007636555.1 LuxR/UhpA family transcriptional regulator VFG1889 Protein 2e-41 47