Gene Information

Name : XAC29_10530 (XAC29_10530)
Accession : YP_007636530.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2442196 - 2442879 bp
Length : 684 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGATCCGCGCCGAAGCGCTGGCCAAGACCTACGCCGAAGGCAAGATGCGCACGCCGGTATTCGATGGCCTGGATCTATC
GGTGGCCACCGGCGAAACCGTGGCCATCGTCGGCGCCTCCGGTGCCGGCAAGAGCACCTTGCTGCATCTGCTCGGCGGGC
TGGATATTCCCACCTCCGGCGAAGTGTATGTGGCCGGCGAGCGCATGTCGGCGCTGTCCGACGCGCAGCGCGGCAAGCTG
CGTAACCAGGCGCTCGGCTTCGTCTACCAGTTCCACCACTTGTTGCCGGAATTCACCGCGTTGGAGAACGTGATGATGCC
GGTGCTGTTGTCCGGCGAGGATGTGGCCGTTGCCAAAAGTCAGGCGCTGCAATTGCTGGAATCGGTCGGGCTTGGGCATC
GCGTCGAACACAAGCCCAGCGAACTCTCCGGCGGCGAGCGTCAGCGCTGTGCGGTGGCGCGTGCACTGGTCAACAAGCCG
GGCTGCGTGTTGGGCGACGAGCCCACCGGCAATCTTGACGACAAGACCGCGGGTACCGTGTTCGAGCTGATGCTGGAACT
CAACCGCGCCCAGCGCACCAGCCTGGTACTGGTGACGCACGACCGCGGCTTGGCACGGCGCCTGGACCGCGTGCTGGAGC
TGCACCAGGGCAAGCTGCGCGAATTGGCGCCGTCTGCGGTGTAA

Protein sequence : 
MIRAEALAKTYAEGKMRTPVFDGLDLSVATGETVAIVGASGAGKSTLLHLLGGLDIPTSGEVYVAGERMSALSDAQRGKL
RNQALGFVYQFHHLLPEFTALENVMMPVLLSGEDVAVAKSQALQLLESVGLGHRVEHKPSELSGGERQRCAVARALVNKP
GCVLGDEPTGNLDDKTAGTVFELMLELNRAQRTSLVLVTHDRGLARRLDRVLELHQGKLRELAPSAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_10530 YP_007636530.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 43
XAC29_10530 YP_007636530.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-30 41