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Name : lysS (XAC29_09470) Accession : YP_007636324.1 Strain : Xanthomonas axonopodis Xac29-1 Genome accession: NC_020800 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2178666 - 2180183 bp Length : 1518 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACCGAGCAGACCCCCGCGCCGCAGCCCCCCGCCGACGAGAACAGCCTCATCGCCGAGCGCCGCGCGAAACTGGGCGC GTTGCGCGGGCAGGGCATCGCCTACCCGAACGACTTCGTGCGCGAACACTTCGCCGGCGATCTGCAGGCAGAATTCGCCG ACGCCGACACCTGGACCCCGGAAGCGCTGGAAGCCAGCGGGCGCACGGTCAGGATGGCCGGCCGCCTGATGGCCAAGCGG GTGATGGGCAAGGCCAGCTTTGCGCAGATCCAGGACGAATCCGGGCGTGTGCAGCTGTTCCTGCAGGGCAATGTGCTCGG CGATGCCTATACCGCGTTCAAGGGCTGGGATGTGGGCGACATCGTGGCGGTGGAGGGAGGGCTCACCCGCACCAAGACCG GCGAGCTGTCGGTCAAGGCCAGCGCGCTGCGCCTGCTGACCAAGTCGCTGCGCCCGTTGCCGGACAAGTGGCACGGCCTG TCGGATGTTGAGCAGCGTTACCGCCAGCGTTATGTCGACCTGATCGTGACACCGGAAGCGCGCGAGGTCTTCATCAAGCG ATCCAAGATCATCCGCGCCATGCGCGCCTGGCTGGACGCGCGCCGCTTCCTGGAAGTGGAAACGCCGATGATGCATTACA TTCCCGGCGGCGCCACGGCCAAGCCATTCACTACCCACCACAATGCGCTGGACCTGGACTTGTACCTCCGCGTCGCCCCA GAGCTGTATCTCAAGCGTCTGGTGGTCGGTGGCCTGGAGCGCGTCTACGAGATCAACCGCAATTTCCGCAACGAAGGCGT GTCGACCCGGCACAACCCCGAGTTCACCATGCTCGAGCTCTACGAGGCTTATGCCACGTACCACCAGATCATGGACCTGA CCGAGCAGGTGATCCGCGACACCGCGCAGTCGGTGTTGGGTACCACGCAGGTGAGCTGGGATGGCGCGGACATCGATTTG GCGCCGGCTTTCCGGCGCTGGCGCATGGATGAGGCCGTTCGTCACCATAATCCGGAGATCAGCGCTGCCGACTGCACCGA CCGCGAGGCGCTGCTGCGCCATTGCGAGCGGCTCAAGATCCGCGTGAAGCCGTCTTACGGCTGGGGCAAGCTGCTGCTGG AGATTTTCGAGGCGACCGTGGAGCACACCCTGGTGCAGCCGACCTTCATCACCGACCACCCGGTCGAAGTGTCGCCGCTG GCGCGTTCCAGCGACACCGAGCCGGGTTACACCGACCGCTTCGAGCTGTTCATCAACGGTAAGGAGCTGGCCAACGGCTT TTCCGAGCTCAACGACCCCGAAGACCAGGCCGCACGTTTCCAGGCGCAGGTGCAGGCCAAGGACGGCGGCGACGACGAAG CGATGCATTTCGATGCCGATTACATCCGTGCCTTGGAGTACGGCATGGCGCCGACCGGCGGCCTGGGCATCGGTATCGAT CGTCTGGTGATGCTGCTGACCGGCAGCACCTCGATCCGCGATGTCCTGCTATTCCCGTACATGCGTCCGGAAGCCTGA Protein sequence : MTEQTPAPQPPADENSLIAERRAKLGALRGQGIAYPNDFVREHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKR VMGKASFAQIQDESGRVQLFLQGNVLGDAYTAFKGWDVGDIVAVEGGLTRTKTGELSVKASALRLLTKSLRPLPDKWHGL SDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAP ELYLKRLVVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDL APAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGKLLLEIFEATVEHTLVQPTFITDHPVEVSPL ARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGID RLVMLLTGSTSIRDVLLFPYMRPEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-129 | 53 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-80 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007636324.1 | lysyl-tRNA ligase | VFG1668 | Protein | 6e-130 | 53 |
