Gene Information

Name : F504_995 (F504_995)
Accession : YP_007632011.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1025322 - 1026854 bp
Length : 1533 bp
Strand : -
Note : FIG00000300

DNA sequence :
ATGACCGAACCGAACACCCCGGCCGCATCCACTGGACAGGCGCAAGACGACAACCAGATCATGGCCGAGCGCCGCGAGAA
GCTCGCCGCGCTGCGCCAGCAGGGCGTCGCCTATCCCAACGATTTCTGCCCGACCCACCACGCGGCCGACCTGCACACCC
GCTACAGCGAGACCGACCAGCCCGCGCTGGAAGCGGCCAATGTCGAGGTCGCCCTCGCCGGGCGCATGATGCTCAAGCGC
GTGATGGGCAAGGCCAGCTTCGCCACCGTGCAGGACGGCAGCGGCCAGATCCAGTTCTACATCACGCGCGACCGCGTGGG
CGAAGACGTCTACGCCGCCTTCAAGCATTGGGACCTCGGCGACATCGTCGCCGCGCGCGGCGTGCTGTTCCGCACCAACA
AGGGCGAGCTGTCGGTGCAGGTGCAGGAGTTGCGCCTGCTGTCGAAGTCGCTGCGTCCGCTGCCGGACAAGTTCCACGGC
CTGGCCGACCAGGAAATGAAGTACCGCCAGCGCTACGTTGACCTGATCGTCTCGCCCGAGACGCGCAACACCTTCCGCGC
CCGCACCAAGGCCATCGCCTCGCTGCGCCACCACATGAGCGATGCCGGCTTCATGGAAGTGGAAACGCCGATGCTGCACC
CGATTCCGGGCGGCGCGGCGGCCAAGCCCTTCATCACGCACCACAACGCGCTGGACATGCAGATGTTCCTGCGCATCGCC
CCGGAGCTGTACCTCAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTACGAGATCAACCGCAACTTCCGCAACGAGGG
CGTGTCGCCACGGCACAACCCCGAGTTCACGATGATGGAGTTCTATGCAGCCTACACGGACTACCGCTGGCTGATGGACT
ACACCGAGAACTTGATCCGCCAGGCCGCCATCGACGCCACCGGCAGCGCCGCCCTCAACTACCAGGGCCGCGAGCTGGAC
CTGTCCAAGCCCTTCCACCGCCTGACCATCTGCCAGGCCATCCAGAAGTACGCGCCGCAGTACACCGACGCGCAACTGGC
CGACGCCGACTTCCTGCGTGCCGAGCTCAAGAAGTTCAAGATCGACACCAACGCGCCGCAGTTCCTGAACGCCGGCGTGG
GCACGCTGCAGCTCGTCCTGTTCGAAGAGACGGCCGAGTCGCAACTGTGGGAGCCGACCTTCATCGTCGACTACCCGGTC
GAGGTGTCGCCGCTGGCACGCGGCTCGGACACGCTGCCCGGCATCACCGAGCGCTTCGAGCTGTTCATCACCGGCCGCGA
GATCGCCAACGGCTTCTCCGAGCTGAACGACCCCGAAGACCAGGCCGAACGCTTCCGCAAGCAGGTCGAACAGAAGGACG
CCGGCGACGAGGAAGCCATGTTCTACGATGCCGACTACATCCGCGCGCTGGAATACGGCATGCCCCCGACCGGCGGCTGC
GGCATCGGCATCGACCGCCTGGTGATGCTGCTGACCGACAGCCCCAACATCCGCGACGTGATCCTCTTCCCGCACCTGCG
CCGCGAAGACTGA

Protein sequence :
MTEPNTPAASTGQAQDDNQIMAERREKLAALRQQGVAYPNDFCPTHHAADLHTRYSETDQPALEAANVEVALAGRMMLKR
VMGKASFATVQDGSGQIQFYITRDRVGEDVYAAFKHWDLGDIVAARGVLFRTNKGELSVQVQELRLLSKSLRPLPDKFHG
LADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRHHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIA
PELYLKRLIVGGFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAALNYQGRELD
LSKPFHRLTICQAIQKYAPQYTDAQLADADFLRAELKKFKIDTNAPQFLNAGVGTLQLVLFEETAESQLWEPTFIVDYPV
EVSPLARGSDTLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGC
GIGIDRLVMLLTDSPNIRDVILFPHLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-122 53
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 9e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_995 YP_007632011.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 2e-122 53