Gene Information

Name : F504_3154 (F504_3154)
Accession : YP_007634165.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Resistance
Product : D-lactate dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.28
Position : 3358415 - 3359410 bp
Length : 996 bp
Strand : +
Note : FIG00000842

DNA sequence : 
ATGCGCATCCTCTTCTTCAGCAGCCACCGTTACGACGAAGACGCCTTCCGCGCCGCGCAGGCGCGCGGCGGCCACGGCTT
CGAGCTGGTCTTCCAGCGCGCCCACCTGGACGTGCACACCGCGCCGCTGGCTGCCGGCTTCGAGGTGGTCTGCCCGTTCG
TCAACGACTGCCTGGATGCCGGCGTGCTCGCCGTGCTGGCCGCGGGCGGCGCCCGGCTGATCGCGCTGCGCTCGGCCGGC
TTCAACCATGTCGACCTGGCCGCGGCGCAGCGGCTGGGGCTGACGGTGGTGCGGGTGCCGGCGTATTCGCCGCACGCGGT
GGCCGAGCACGCGGTCGGCATGATCCTCACGCTCAACCGGCGCCTGCACCGCGCCTGCAACCGCACCCGCGAGGGCGACT
TCTCGCTCGACGGGCTGCTCGGCTTCGACCTGGCCGGCAAGACCGTCGGCGTGGTCGGCACCGGGCAGATCGGGCAGGTG
TTCGCGCGCATCATGGCCGGCTTCGGCTGCCGGCTGCTGGCGTTCGATCCGTTCCCGCAGCCGGCGCTGGCGGCGCTCGG
CGTGACCTACGTGCCGCTGCCGGCTCTGCTGGCGCAGTCCGACATCGTCAGCCTGCACTGCCCGCTCAACGCCGACACGC
ACCACCTGATCGACGCCGGCGCACTCGCCAGCATGAAGACGGGCGCCATGCTGATCAACACCAGCCGCGGCGGGCTGGTC
GACAGCCCCGCACTGATCGACGCCCTCAAATCCGGCCAGCTCGGCCACCTCGGGCTGGACGTCTATGAGGAAGAGGCCGA
CCTGTTCTTCGAGGACCGCTCCGCCGATGTGCTGCAGGACGACGTGCTGGCGCGCCTGCTGACCTTCCCCAATGTCATCG
TGACCGCGCACCAGGCCTTCTTCACGCGCGAGGCGCTGGCGGGCATTGCCGACACCACGCTCGCCAACGTGGCGGCATGG
GCAGCCGGCGCGCCCGCGAATGTGGTGAAGGCTTAG

Protein sequence : 
MRILFFSSHRYDEDAFRAAQARGGHGFELVFQRAHLDVHTAPLAAGFEVVCPFVNDCLDAGVLAVLAAGGARLIALRSAG
FNHVDLAAAQRLGLTVVRVPAYSPHAVAEHAVGMILTLNRRLHRACNRTREGDFSLDGLLGFDLAGKTVGVVGTGQIGQV
FARIMAGFGCRLLAFDPFPQPALAALGVTYVPLPALLAQSDIVSLHCPLNADTHHLIDAGALASMKTGAMLINTSRGGLV
DSPALIDALKSGQLGHLGLDVYEEEADLFFEDRSADVLQDDVLARLLTFPNVIVTAHQAFFTREALAGIADTTLANVAAW
AAGAPANVVKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 5e-29 44
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 5e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_3154 YP_007634165.1 D-lactate dehydrogenase AF310956.2.orf4.gene Protein 2e-29 44
F504_3154 YP_007634165.1 D-lactate dehydrogenase U35369.1.gene5.p01 Protein 6e-30 44
F504_3154 YP_007634165.1 D-lactate dehydrogenase NC_014475.1.orf2.gen Protein 3e-29 43
F504_3154 YP_007634165.1 D-lactate dehydrogenase NC_005054.2598279.p0 Protein 3e-29 43
F504_3154 YP_007634165.1 D-lactate dehydrogenase AF155139.2.orf4.gene Protein 2e-27 42