Gene Information

Name : F504_3088 (F504_3088)
Accession : YP_007634099.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Unknown
Product : Mobile element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3291933 - 3292898 bp
Length : 966 bp
Strand : +
Note : FIG01306568

DNA sequence :
ATGAAACAAAGCGACCTTGGCCTGGACCTGAGCAACCGACGCACGCGCAAGCAGGTATTTCTGGATGAGATGGAACGTGT
GGTGCCGTGGCAGGCGTTTTTGGCGTTGATAGCGCCGCATGCGCCGGTCAAGGCGACGGGTCGGAAGCCGTTTCCAGTCG
AAACGATGCTGCGCATCCACTTTCTGCAGCAATGGTTCGGGCTGACGGACGTGGCGATGGAAGAGGCGCTGTACGACGTG
CCGTTGTATCGGCAATTCGCGGGGCTGGGAGGCATAAGCCGACTGCCGGACCGGGTCAGCATTCTGCGCTTTCGGCACTT
GCTGGAGCGACACCAGTTAGCCGAGCAATTTCTGCAGACCGTCAACGCGCAACTCAGTGCGAAGGGCTACCTGCTCAAAG
AGGGCACGGTGGTCGACGCCTCGCTGATTGCCGCGCCCAGTTCGACCAAGAATGGCAGCGGCAAGCGTGACCCAGAGATG
CACCAGACCAAGAAAGGTAACCAGTGGCATTTCGGCATGAAAGCGCACATTGGTGTGGATGCGGACTCGGGGCTGGTGCA
CACCGTAGTGGGCACGGCCGCCAACGTCAACGACGTGACGCAAGCGCACGCATTGGTGCATGGCAAGGAGGCCGACGTGT
TCGGCGATGCCGGCTACCAGGGCATCGACAAGCGCGAAGAGGTGCAGAAGTTGAAGGTGCGTTGGCATGTGGCATTGCGA
CCGAGCAAACGCCGCGCCTTGGACAAGAACACCGTGTCGGGTGCGCTCGTCGATGAGTTGGAGCGGGTCAAGGCGCGCAT
TCGTGCTCGCGTAGAACATCCGTTCCGGGTCATCAAGCGCCAGTTCGGGCATTTGAAGGTGCGCTATCGAGGCTTGGTGA
AGAACACGCAGCAGTTACATACGTTGTTTGCCCTGAGCAATCTATGGATGATGCGCGGACGACTGATGCGTGAGGCCCGC
GCATGA

Protein sequence :
MKQSDLGLDLSNRRTRKQVFLDEMERVVPWQAFLALIAPHAPVKATGRKPFPVETMLRIHFLQQWFGLTDVAMEEALYDV
PLYRQFAGLGGISRLPDRVSILRFRHLLERHQLAEQFLQTVNAQLSAKGYLLKEGTVVDASLIAAPSSTKNGSGKRDPEM
HQTKKGNQWHFGMKAHIGVDADSGLVHTVVGTAANVNDVTQAHALVHGKEADVFGDAGYQGIDKREEVQKLKVRWHVALR
PSKRRALDKNTVSGALVDELERVKARIRARVEHPFRVIKRQFGHLKVRYRGLVKNTQQLHTLFALSNLWMMRGRLMREAR
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 2e-86 60
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 1e-72 59
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 2e-72 59
unnamed AAO33449.1 putative transposase Not tested Not named Protein 7e-62 56
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 3e-64 50
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 3e-64 50