Gene Information

Name : tctD (F504_2899)
Accession : YP_007633910.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Virulence
Product : Tricarboxylate transport transcriptional regulator TctD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3110463 - 3111170 bp
Length : 708 bp
Strand : +
Note : FIG00018902

DNA sequence : 
ATGCGGATCTTGCTGGTGGAGGATGAAGGGGAACTGGCGGCGTGGCTCGCGCGCGCGCTGGCGCAGAGCGGCTTCGTGGT
GGAGCGCGCGGCGGACGGGCTGGCGGCGGAAGCGTTCCTGGCCTCGGGCGAATTCGACGCCGTCGTGCTGGACCTGCGCC
TGCCGCGCAAGGACGGCTTTGCCGTGCTGGCCGACATGCGCGCGCGCGACGATCGCACGCCGGTGCTGATCCTGACGGCC
CAGGGCGCACTGGACGAGCGCGTGCGCGGCCTGAACGCCGGCGCCGACGACTTCCTCACCAAACCGTTTGCGCTGACGGA
GCTCGAAGCGCGGCTGATGGCGCTGATCCGCCGCAGCCGGGGCCGGGCGTTCCCGCGCCTGCGCTGCGGACCGCTGGAAT
TCGACACCGGCCGCAAGGCCTTCCTGCTGGCGGGCGAGCCGCTGTCGCTGACGCCGCGCGAGCACGCCGCGCTGTCCGCG
CTGCTGCACAAGACCGGGCAACCGATCAGCAAGGTCCATCTGTTCGACAAAGTGTTCAATCTGGACAGCGATTCCAGCCC
GGACGCCGTGGAAGTGGTCGTGCATCGCCTGCGCAAGAAGCTGGCGGGGTCCGGTGTGCAGATCGTCACGGTGCGCGGGC
TGGGCTACCTGCTCGAAGCCGAAGCGAGCGGCGTCCCGCAGGCGGCGGGCGACACATCCGCGCCATGA

Protein sequence : 
MRILLVEDEGELAAWLARALAQSGFVVERAADGLAAEAFLASGEFDAVVLDLRLPRKDGFAVLADMRARDDRTPVLILTA
QGALDERVRGLNAGADDFLTKPFALTELEARLMALIRRSRGRAFPRLRCGPLEFDTGRKAFLLAGEPLSLTPREHAALSA
LLHKTGQPISKVHLFDKVFNLDSDSSPDAVEVVVHRLRKKLAGSGVQIVTVRGLGYLLEAEASGVPQAAGDTSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_007633910.1 Tricarboxylate transport transcriptional regulator TctD BAC0487 Protein 9e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD YP_007633910.1 Tricarboxylate transport transcriptional regulator TctD VFG0473 Protein 1e-34 42