Gene Information

Name : F504_1985 (F504_1985)
Accession : YP_007632998.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Virulence
Product : Urease alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 2145764 - 2147482 bp
Length : 1719 bp
Strand : -
Note : FIG00002050

DNA sequence :
ATGACACTCAAGATCACCCGCCGCGCCTATGCGGAGATGTTCGGCCCGACCACCGGCGACCGCGTCCGCCTGGCCGACAC
CGACCTCATCGTCGAGGTCGAGCGCGACTACACGATCTACGGCGAAGAGGTGAAATTCGGCGGCGGCAAGGTCATCCGCG
ACGGCATGGGCCAGAGCCAGCGCGAATCGAAGGACTGCGCCGACACGGTCATCACCAACGCGCTGATCATCGACCACTGG
GGCATCGTCAAGGCCGACATCGGCCTGAAGCACGGCCGCATCGCCGCCATCGGTAAGGCGGGCAATCCGGACATCCAGCC
GGGCGTGAACATCGTCATCGGGCCGGGCACCGAGATCATCGCGGGCGAAGGCATGATCGTCACGGCGGGCGGGGTCGATA
CGCATATCCATTTCATCTGCCCGCAGCAGATCGACGAGGCGCTCAACAGCGGCGTGACGACCATGATCGGCGGCGGCACC
GGGCCGGCCACAGGCACCTACGCGACCACCTGCACGCCGGGGCCGTGGCACCTGCAGCGCATGCTGCAGGCGGCCGATGC
CTACCCGATGAACATCGGTTTCCTGGGCAAGGGCAACGGCAGCCTGCCCGGCGCGCTGCGCGAGCAGATCGATGCCGGCG
CCATCGGCCTGAAGCTGCACGAAGACTGGGGCTCGACGCCCGCCGCCATCGACTGCTGCCTGGGCGTGGCCGACGACACC
GACACGCAGGTCGCCATCCACACCGACACGCTCAACGAATCGGGCTTCGTCGAGGCGACCATCGCCGCGTTCAAGGGCCG
CACCATCCACACGTATCACACCGAGGGGGCGGGCGGCGGCCATGCGCCGGACATCATCCGCGTGTGCGGCGAGTCCAACG
TGCTGCCCTCGTCGACCAACCCGACGCGGCCGTTCACCGTCAACACGCTGGACGAGCACCTCGATATGCTGATGGTGTGC
CACCATCTGGACGCCTCCATCGCCGAGGACATCGCCTTCGCCGAGAGCCGCATCCGCCGAGAAACCATCGCCGCCGAAGA
CATCCTGCACGACCTGGGCGCGTTCTCGATGCTCTCGAGCGACTCGCAGGCCATGGGCCGCGTCGGCGAGGTGATCCTGC
GCACCTGGCAGACCGCGCACAAGATGAAGGCGCAGCGCGGCAAGCTGGCCGGCGACCCGAACGACGCGCGCGGCGGGCAC
GACAACTTCCGCGTCAAGCGCTACGTCGCCAAGTACACGATCAACCCCGCCATCACGCACGGTATTGCGCACGAGGTCGG
CTCGATCGAGGTCGGCAAGTGGGCCGACCTAGTGCTGTGGAAGCCTGCCTTCTTCGGCGTCAAGCCGAGCCTGATTCTCA
AGGGCGGCATGATTGCTTCGGCGGCGATGGGCGATGCCAATGCGTCGATCCCGACGCCGCAGCCGGTGCACTACCGGCCG
ATGTTCGCGGCGGCGGGCGGCGCGCTGGCGCGGTCGTCGCTGAGCTTCCTCTCGCAATCGGCGGCGCAGGCCGGCGTGGC
CGAGCGCTACGGCCTCGCCAAGACGACCGCCGTCGTTCGGGGCACGCGCGCGGTCACCAAGGCGCAGATGATCCACAACG
ACTGGCAGCCCAGCATCACGGTCGATCCCGAGACCTACCAGGTCGTCGCCGACGGCATGCTGCTGACCTGCGAGCCGGCC
GAGGTGCTGCCGATGGCGCAGCGCTATTTCCTGTTCTGA

Protein sequence :
MTLKITRRAYAEMFGPTTGDRVRLADTDLIVEVERDYTIYGEEVKFGGGKVIRDGMGQSQRESKDCADTVITNALIIDHW
GIVKADIGLKHGRIAAIGKAGNPDIQPGVNIVIGPGTEIIAGEGMIVTAGGVDTHIHFICPQQIDEALNSGVTTMIGGGT
GPATGTYATTCTPGPWHLQRMLQAADAYPMNIGFLGKGNGSLPGALREQIDAGAIGLKLHEDWGSTPAAIDCCLGVADDT
DTQVAIHTDTLNESGFVEATIAAFKGRTIHTYHTEGAGGGHAPDIIRVCGESNVLPSSTNPTRPFTVNTLDEHLDMLMVC
HHLDASIAEDIAFAESRIRRETIAAEDILHDLGAFSMLSSDSQAMGRVGEVILRTWQTAHKMKAQRGKLAGDPNDARGGH
DNFRVKRYVAKYTINPAITHGIAHEVGSIEVGKWADLVLWKPAFFGVKPSLILKGGMIASAAMGDANASIPTPQPVHYRP
MFAAAGGALARSSLSFLSQSAAQAGVAERYGLAKTTAVVRGTRAVTKAQMIHNDWQPSITVDPETYQVVADGMLLTCEPA
EVLPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 1e-174 74
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 1e-174 74
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-155 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-155 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-155 62
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-154 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_1985 YP_007632998.1 Urease alpha subunit VFG0270 Protein 5e-148 65