Gene Information

Name : F504_1715 (F504_1715)
Accession : YP_007632728.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Unknown
Product : Transcription accessory protein (S1 RNA-binding domain)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1860294 - 1862633 bp
Length : 2340 bp
Strand : +
Note : FIG00001712

DNA sequence :
ATGACCGATTCCGTGCTGCAAAAGATCGTCTCCCGCATCGCCGCCGAGCTGTCGGTGAAGCCGCAGCAAGTCGCCGCCGC
CGTGCAGCTGCTGGATGAAGGCGCCACCGTGCCGTTCATCGCGCGCTACCGCAAGGAAGCCACCGACAACCTGGACGATA
CGCAACTGCGCAACCTGGAAGAGCGCCTGCTGTACCTGCGCGAGCTGGAAGACCGCCGCGCGGCCATCCTGGCTTCCATC
GAGGAACAGGGCAAGCTGACCGACCCGCTGCGCGCCGCCATCGAGGCAGCCGAGACCAAGCAGGTGCTGGAAGACCTCTA
CCTGCCCTACAAGCCCAAGCGCCGCACCCGCGCGCAGATCGCCCGCGAATGCGGCCTGGAGCCGCTGGCCCAGGCGCTGC
TCGCCGATCCCACGCTCGACCCGCAGGCCGAGGCCGCCAAGTTCGTCAACGGCCAGCCGACCGCGGAAGGCGGCGTGCCC
GACGCCAAGGCCGCGCTGGACGGCGCGCGCGACATCCTCTCCGAACAGTTCGGCGAGACCGCGGAGCTGCTCGGCAAGGT
GCGCGACCACCTGTGGAACCAGGGTGTGATCGCCTCCGCCGTGGTCGAGGGCAAGGAAACCGCCGAGGAAGAGAAGTTCC
GCGACTACTACGCCTACAGCGAGCCGATCCGCAACGTGCCGTCGCACCGCGCGCTGGCGCTGTTCCGCGGCCGCAATGCG
GGCGTGCTGTTCGTCAAGCTGGGCCTGGGCGAAGAGCAGGACACGATGAGCCCGCATCCGTGCGAAACCATGATCGCGCG
CCATGTCGGCATCGAGAACAAGGGCCGCGCGGCCGACAAATGGCTGTCGGACGTGTGCCGCTGGTGCTGGCGCGTCAAGG
TGCAGCCGCACATCGAGACCGAACTGCTGACGCAGCTGCGCGAATCCGCCGAAGCCGAGGCCATCAAGGTCTTTGGCCGC
AACCTGCACGACCTGCTGCTGGCCGCGCCCGCCGGCCCGAAGGCGGTGATGGGCGTCGACCCCGGCATCCGCACCGGCTG
CAAGGTGGCCGTGGTCGACCACACCGGCAAGCTGCTGGAAACCGCCACGATCTATCCCCACGAGCCGCGCCGCGACTGGA
ACGGCTCGCTGGCCACCCTCGCCCGCCTGGCCAAGCAGCACGGCGTGGCGCTGGTGTCGATCGGCAACGGCACCGCCAGC
CGCGAGACCGACAAGCTGGTGCAGGACCTGATGCATCACCTGGCCAAATCAGCACCCGAAATGAAGCTGACCAAGATCGT
GGTGAGCGAGGCCGGCGCATCGGTATATTCGGCCTCCGAGCTGGCGGCCAAGGAATTCCCCGACCTGGACGTGTCGCTGC
GCGGCGCGGTGTCGATCGCCCGCCGCCTGCAGGACCCGCTGGCCGAGCTCGTGAAGATCGACCCGAAGTCGATCGGCGTG
GGCCAATACCAGCACGACGTCAACCAGCGCGAGCTGGCCCGCGCGCTGGACGCCGTGGTCGAGGACTGCGTGAACGCGGT
CGGCGTCGACGTCAACACAGCCTCGACCGCGCTGCTGGCGCGCGTGTCGGGGCTCAACGCGATCCTGGCCAAGAACATCG
TCGAATACCGCGACGCCAACGGCGTGTTCGCCAACCGCGAAGCCCTCAGGCAGGTGCCGCGCCTGGGCGACAAGACCTTC
GAGCAGGCCGCCGGCTTCCTGCGCATCAACAACGGCGACAACCCGCTCGACCGCTCCTCGGTGCACCCGGAAGCGTATCC
GGTGGTGCAGCGCATTCTCGAGCGCATCAAGAAAGGCATCGGCGACGTGCTCGGCAACCGCGAGGCGCTGCGCGGCCTGA
CCGCGCAGGAGTTCACCGACGACAAGTTCGGCCTGCCGACCGTGGTCGACATCCTGGGCGAACTCGAGAAGCCCGGCCGC
GATCCGCGCCCGGAATTCAAGACCGCCACCTTCCAGGACGGCGTGGAAGACATCAAGGACCTGCAGCCCGGCATGGTGCT
GGAAGGCGTGGTGACCAACGTGGCGGCCTTCGGCGCGTTCATCGACATCGGCGTGCACCAGGATGGGCTGGTGCACGTGT
CGGCCCTGTCGACTAAGTTCGTGCGTGATCCGCACGAGGTGGTCAAGCCCGGCCAGATCGTCAAGGTCAAGGTGATGGAG
GTGGACGTCAAGCGCAACCGCATCGGCCTGACGATGCGACTGACCGACGAGCCGGGCCAGGTGCCCGCGCGCAGCGGCGG
CGACCGCCCCGCCGGCGGCAACCGCAACGGCGGCCAGCAGCGCCGCGCACCGGAACCCGCCGGCGCCATGGCCGCGGCGT
TCGCCAAGCTCAAGCGCTGA

Protein sequence :
MTDSVLQKIVSRIAAELSVKPQQVAAAVQLLDEGATVPFIARYRKEATDNLDDTQLRNLEERLLYLRELEDRRAAILASI
EEQGKLTDPLRAAIEAAETKQVLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTLDPQAEAAKFVNGQPTAEGGVP
DAKAALDGARDILSEQFGETAELLGKVRDHLWNQGVIASAVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRNA
GVLFVKLGLGEEQDTMSPHPCETMIARHVGIENKGRAADKWLSDVCRWCWRVKVQPHIETELLTQLRESAEAEAIKVFGR
NLHDLLLAAPAGPKAVMGVDPGIRTGCKVAVVDHTGKLLETATIYPHEPRRDWNGSLATLARLAKQHGVALVSIGNGTAS
RETDKLVQDLMHHLAKSAPEMKLTKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGV
GQYQHDVNQRELARALDAVVEDCVNAVGVDVNTASTALLARVSGLNAILAKNIVEYRDANGVFANREALRQVPRLGDKTF
EQAAGFLRINNGDNPLDRSSVHPEAYPVVQRILERIKKGIGDVLGNREALRGLTAQEFTDDKFGLPTVVDILGELEKPGR
DPRPEFKTATFQDGVEDIKDLQPGMVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVME
VDVKRNRIGLTMRLTDEPGQVPARSGGDRPAGGNRNGGQQRRAPEPAGAMAAAFAKLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 64