Gene Information

Name : smpB (F504_1471)
Accession : YP_007632485.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1539266 - 1539712 bp
Length : 447 bp
Strand : -
Note : FIG00000194

DNA sequence :
ATGACCATCGCCGACAACAAGAAAGCCTTTTTCGATTACTTCGTCGAAGAGCGCTATGAGGCGGGCATCGCACTCGAAGG
CTGGGAGGTGAAGGCCATCCGCGCCGGCCGCGTGCAGATCAAGGAAGGCTACGTCGTCATTCGCGACGCCGAGCTGTTCC
TGATCGGGGCGCACATCAGCCCGCTGCAATCCGCCTCCACGCACGTCAAGCCCGACCCGACGCGCACCCGCAAGCTGCTG
CTGCACGCCGAAGAGATCAAGAAGCTGATCGGCAAGGTCGAGCAGCGCGGCTATACGCTCGTGCCGCTCAACCTGCACTA
TGCGCGCGGCCGCGTGAAGTGCGAGATCGGCCTGGCCAAGGGCAAGAAGCTCTACGACAAGCGCGAGACCGAGAAGGACC
GCGACTGGCAGCGCGAGAAGGCGCGGCTCATGCGCGAGAAGGCCTGA

Protein sequence :
MTIADNKKAFFDYFVEERYEAGIALEGWEVKAIRAGRVQIKEGYVVIRDAELFLIGAHISPLQSASTHVKPDPTRTRKLL
LHAEEIKKLIGKVEQRGYTLVPLNLHYARGRVKCEIGLAKGKKLYDKRETEKDRDWQREKARLMREKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-35 54
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-21 45
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-24 42