Gene Information

Name : lolD (F504_1143)
Accession : YP_007632158.1
Strain : Ralstonia solanacearum FQY_4
Genome accession: NC_020799
Putative virulence/resistance : Resistance
Product : Lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1176225 - 1176959 bp
Length : 735 bp
Strand : +
Note : FIG00000771

DNA sequence : 
ATGAGTGAGGCCGTGATGACCGCCAACGAGACCACGCACCGCGCCGAGTGGGGTGATACCGCGGTGCTGCAGGCGCAGGG
ACTGGTCAAGGCGTTCAGGCAGGGGGGGCTGAATGTCGATGTGCTCAGGGGCGTCGACATCCGCATCGGCGTGGGCGAGA
AGGTCGCCATCGTCGGCGCGTCGGGCTCGGGCAAGAGCACGCTGCTGCATGTGCTGGGCGGGCTGGACGTGCCCACCTCG
GGCCGCGTGTCGCTGCTCGGCAAGCCGTTCACCGCCATGAGCGAGCGCGAGCGCAATACGCTGCGCAACCGCGCGCTGGG
CTTCGTCTACCAGTTCCACCACCTGCTGCCGGAGTTCACCGCGCTCGACAACGTCGCCATGCCGCTGCGCATCCGCGGCG
AGAACGAAGCGCAGGCGCGCCATACCGCGCAGGCCATGCTGGCGCGCGTGGGCCTGGGCGAGCGCACGGCGCACCGGCCG
GGCGAGCTGTCCGGCGGCGAGCGCCAGCGGGTGGCGATCGCGCGCGCGCTGGTGGGCTCGCCCGCCTGCGTGCTGGCCGA
CGAGCCCACCGGCAACCTCGACGACCACACCGCCGGCGAGGTCTTCGACCTGATGCTGGAGCTGACGCGCACGCTCGGCA
CCAGTTTTGTCATCGTCACGCACGATATCGACCTCGCCGGGCGCTGCGATCGCATCCTGCGTCTGCGCGACGGACATCTG
CACCAGGAACGGTAA

Protein sequence : 
MSEAVMTANETTHRAEWGDTAVLQAQGLVKAFRQGGLNVDVLRGVDIRIGVGEKVAIVGASGSGKSTLLHVLGGLDVPTS
GRVSLLGKPFTAMSERERNTLRNRALGFVYQFHHLLPEFTALDNVAMPLRIRGENEAQARHTAQAMLARVGLGERTAHRP
GELSGGERQRVAIARALVGSPACVLADEPTGNLDDHTAGEVFDLMLELTRTLGTSFVIVTHDIDLAGRCDRILRLRDGHL
HQER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_007632158.1 Lipoprotein releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 6e-33 47
lolD YP_007632158.1 Lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 6e-40 42